Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_021855.1 Length=32382 Score E Sequences producing significant alignments: (Bits) Value seq4345 84.2 5e-12 >seq4345 Length=47284 Score = 84.2 bits (92), Expect = 5e-12 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 24697 CCAACTTTAACCCATGCTGTATGACCGTCTGTGTGATAATTTAACCCTTGTTCATTTTCA 24756 || ||||||||||| | | | ||||| ||||||||||| | || | | |||||||| Sbjct 36931 CCGACTTTAACCCACCCGGATTTGCCGTCAGTGTGATAATTCCATCCGTCTGCATTTTCA 36990 Query 24757 TAAACTTTACTGTTAGCTTCAGGATATACTTTTTTAACTTCAGACCATGCAAATGCCCAA 24816 ||||| | |||| |||||||||| | |||||||| ||| ||| || ||||||| Sbjct 36991 TAAACAGTGTTGTTTGCTTCAGGATGAAGTTTTTTAAGTTCTCCCCACGCCCATGCCCAT 37050 Query 24817 CTAAGATAA 24825 ||||||| Sbjct 37051 GAAAGATAA 37059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103470328846976