Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq783 143 2e-29
seq242 132 4e-26
seq2315 123 2e-23
seq1551 107 2e-18
seq211 96.9 3e-15
>seq783
Length=580412
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | || || || || || ||||| || || || ||||| || ||| |
Sbjct 389901 ATGCAGATTTTTGTGAAGACTCTTACTGGCAAAACCATCACTCTAGAAGTTGAGGCCTCA 389960
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | |||| || ||| ||||| || || || ||||| || || || || |||
Sbjct 389961 GACACAATCGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGCATTCCCCCAGACCAA 390020
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||| || ||||| || ||| ||| | |||| || || |||
Sbjct 390021 CAGAGATTGATCTTTGCCGGCAAGCAGCTTGAAGATGGACGAACCCTGTCCGACTACAAC 390080
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||||| ||||| ||||| || | ||||||||| | || || ||
Sbjct 390081 ATTCAAAAAGAATCTACACTTCATCTTGTGTTGCGACTTCGTGGTGG 390127
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | ||||| || ||||| ||||||||||| | ||||| || || |
Sbjct 390129 ATGCAGATTTTTGTAAAAACTCTTACCGGGAAAACTATTACTTTGGAAGTCGAGGCTTCG 390188
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || ||| || || || ||||| ||||| || || || || |||
Sbjct 390189 GATACGATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGCATTCCCCCAGACCAA 390248
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||| || || ||||| ||||| ||| | |||||||| |||
Sbjct 390249 CAGAGATTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCAGATTACAAC 390308
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| || ||||| ||||| || | ||| || || | || || ||
Sbjct 390309 ATTCAGAAAGAATCTACACTCCATCTTGTGCTGAGACTTCGTGGTGG 390355
Score = 107 bits (118), Expect = 2e-18
Identities = 139/191 (73%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| || || |||||||| || || | ||||| || || |
Sbjct 390357 ATGCAGATTTTCGTGAAAACCCTTACTGGTAAAACCATCACTTTGGAAGTCGAGGCTTCA 390416
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || ||| ||||| || ||||| ||||| || || || || |||
Sbjct 390417 GACACGATCGAAAACGTTAAAGCCAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAA 390476
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||| || || ||||| |||||| || | ||||||| || ||
Sbjct 390477 CAGAGATTGATCTTTGCTGGCAAGCAGCTAGAGGATGGAAGGACTCTGTCAGACTACAAT 390536
Query 24884 ATTCA-AAAGG 24893
||||| |||||
Sbjct 390537 ATTCAGAAAGG 390547
Score = 100 bits (110), Expect = 3e-16
Identities = 138/192 (72%), Gaps = 1/192 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | || || || || || |||||||| || || ||||| ||||| |
Sbjct 387057 GATGCAGATTTTCGTGAAGACCCTGACAGGGAAAACTATCACCCTAGAAGTTGAAGCTTC 387116
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || | || || ||||| ||||||||||| ||||| ||||| || ||
Sbjct 387117 AGATACCATTGAGAACGTGAAGGCTAAGATTCAAGACAAAGAGGGAATTCCTCCAGACCA 387176
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | || |||||||| || ||||| |||| || |||| ||||||| || ||
Sbjct 387177 ACAGAGATTAATCTTTGCTGGCAAACAATTGGAAGACGGAAGAACGCTGTCAGACTACAA 387236
Query 24883 CATTCA-AAAGG 24893
|| || |||||
Sbjct 387237 TATACAGAAAGG 387248
>seq242
Length=1788442
Score = 132 bits (146), Expect = 4e-26
Identities = 147/192 (77%), Gaps = 3/192 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| |||| |||||||| ||||| ||||| || |||||| |
Sbjct 1569777 ATGCAGATATTCGTGAAAACTTTAACGGGTAAAACAATTACCCTCGAGGTTGAAGCCTCT 1569836
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | |||| || ||| || ||||||||||| ||||| || ||||| ||||||
Sbjct 1569837 GATACTATTGAAAATGTGAAAGCCAAAATCCAAGACAAGGAAGGCATCCCTCCTGATCAA 1569896
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882
|| | ||||| ||||| || || ||||| ||||| | || |||| | || ||||||||
Sbjct 1569897 CAGAGATTGATTTTTGCTGGAAAGCAGCTAGAGGA-TGGACGAACACTCTCTGATTATAA 1569955
Query 24883 CATTCA-AAAGG 24893
||||| |||||
Sbjct 1569956 TATTCAGAAAGG 1569967
>seq2315
Length=138946
Score = 123 bits (136), Expect = 2e-23
Identities = 143/190 (75%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| ||| | ||||| || || |||||||| || || || || || ||| | |
Sbjct 26777 GATGCAGATTTTTGTGAAAACTCTTACTGGTAAAACCATAACCCTTGAGGTGGAACCATC 26836
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || | |||||| ||| || ||||||||||| || || ||||| |||||
Sbjct 26837 TGATACCATTGAGAATGTAAAAGCAAAAATTCAAGACAAAGAGGGGATTCCTCCTGATCA 26896
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATA 24881
|| | ||||| || || |||||||||||||| || | || ||| | ||||| ||||
Sbjct 26897 GCAGAGATTGATTTTCGCAGGGAAACAGCTGGAAGA-TGGACGCACACTTTCAGACTATA 26955
Query 24882 ACATTCAAAA 24891
||||||||||
Sbjct 26956 ACATTCAAAA 26965
Score = 118 bits (130), Expect = 1e-21
Identities = 139/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| |||| || | || || |||||||| || | ||||| ||| | |
Sbjct 27131 ATGCAAATCTTCGTTAAGACTTTGACTGGAAAAACTATCACCTTGGAAGTGGAACCATCT 27190
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| ||| | |||| |||||| |||||| |||||||| ||||| || ||||| |||||
Sbjct 27191 GATACAATTGAAAATGTAAAAGCAAAGATACAAGACAAGGAAGGTATTCCTCCTGATCAG 27250
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | | |||||||| || || |||||||||||| | | |||| ||||| |||
Sbjct 27251 CAAAGACTTATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACACTGTCTGATTACAAC 27310
Query 24884 ATTCAAAA 24891
|| |||||
Sbjct 27311 ATACAAAA 27318
Score = 116 bits (128), Expect = 3e-21
Identities = 143/192 (74%), Gaps = 4/192 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | || || || || || ||||| || || || || |||||| | |
Sbjct 27520 ATGCAGATATTTGTGAAGACCCTCACAGGAAAAACCATCACACTGGAGGTAGAACCATCT 27579
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | |||| ||||| |||||| ||||||||||||||||| || || |||||
Sbjct 27580 GATACCATTGAAAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCACCAGATCAG 27639
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
|| || || || ||||| || |||||| |||| ||| ||| | || |||| || || |
Sbjct 27640 CAGCGATTAATTTTTGCAGGCAAACAGTTGGAAGATGGTCG-CACAC-TGTCGGACTACA 27697
Query 24882 ACATTCAAAAGG 24893
| ||||||||||
Sbjct 27698 ATATTCAAAAGG 27709
Score = 109 bits (120), Expect = 5e-19
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | || || || || || ||||| || || || || |||||| | |
Sbjct 28961 ATGCAGATATTTGTGAAGACCCTCACAGGAAAAACCATCACACTGGAGGTAGAACCATCT 29020
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | |||| ||||| |||||| ||||||||||||||||| || || || ||
Sbjct 29021 GATACCATTGAAAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCACCAGACCAG 29080
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || || || ||||| || |||||| |||| ||| | | |||| || || ||
Sbjct 29081 CAGCGATTAATTTTTGCAGGAAAACAGTTGGAAGATGGCCGCACACTGTCGGACTACAAT 29140
Query 24884 ATTCAAAAGG 24893
||||||||||
Sbjct 29141 ATTCAAAAGG 29150
Score = 104 bits (114), Expect = 2e-17
Identities = 139/190 (73%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | || || || || || ||||| || || || || |||||| | |
Sbjct 28022 ATGCAGATATTTGTGAAGACCCTCACAGGCAAAACCATCACACTGGAGGTAGAACCATCT 28081
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | |||| ||||| ||| || ||||||||||||||||| || || |||||
Sbjct 28082 GATACCATTGAAAATGTAAAGGCAAAAATTCAAGACAAAGAAGGAATCCCACCAGATCAG 28141
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
|| || || || ||||| || |||||| |||| ||| ||| | || |||| || || |
Sbjct 28142 CAGCGATTAATTTTTGCAGGCAAACAGTTGGAAGATGGTCG-CACAC-TGTCGGACTACA 28199
Query 24882 ACATTCAAAA 24891
| || |||||
Sbjct 28200 ATATCCAAAA 28209
Score = 102 bits (112), Expect = 7e-17
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || || || || ||||| | ||||| ||| | |
Sbjct 32993 ATGCAGATCTTTGTGAAGACCTTGACAGGAAAGACAATTACATTGGAAGTGGAACCTTCA 33052
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | |||||| |||||| ||||| || || ||||| ||||| || ||
Sbjct 33053 GATACCATTGAGAATGTAAAAGCAAAGATTCAAGATAAGGAGGGAATCCCTCCAGACCAG 33112
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
|| | | || ||||| || |||||||| |||||| ||| | || | |||||||| |
Sbjct 33113 CAGAGACTCATTTTTGCTGGCAAACAGCTCGAGGATGGTCG-CACAC-TTTCAGATTACA 33170
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
| ||||| || || || || || || ||||| | || |||| || ||
Sbjct 33171 ATATTCAGAAAGAGTCTACTCTGCATTTGGTTCTCCGTCTGCGAGGTGG 33219
>seq1551
Length=444118
Score = 107 bits (118), Expect = 2e-18
Identities = 135/183 (74%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 24749 GAAGTAGAAGCCACCGACAC-AGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGG 24807
||||| || || | ||||| | || ||||| |||| | ||| || || ||| |||||
Sbjct 25522 GAAGTCGAGGCTTCAGACACGATTAAAAACGTTAAATCCAAAATTCAGAG-CAAGGAAGG 25464
Query 24808 AATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAA 24867
|| ||||| || ||||| | |||||||||||||| || ||||| |||||| ||||
Sbjct 25463 CATTCCTCCAGACCAACAGAGATTGATCTTTGCCGGCAAGCAGCTTGAGGATGGAAGAAC 25404
Query 24868 CATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGG 24927
||||||| || || ||||| || ||||| ||||| || |||| || || ||| | ||
Sbjct 25403 ATTGTCAGACTACAATATTCAGAAAGAATCCACACTTCATCTGGTTTTCCGGTTGAGAGG 25344
Query 24928 AGG 24930
||
Sbjct 25343 TGG 25341
>seq211
Length=1809889
Score = 96.9 bits (106), Expect = 3e-15
Identities = 92/118 (78%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182
||||| || ||||| | |||||||| || || || || || || || || || || |||
Sbjct 911714 TATTCCACTATTTCTGTGCACAAATTGCTGCATTTAATTGTCCCCAAGTTCTGCTGGTTG 911655
Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTG 139240
||||||||| ||||||||||| || ||||| || ||||| ||||| || |||||||
Sbjct 911654 GATTTTCGGTTGCAAGCATCTTTATACAGCATGTATGGTGTTCCAGTCTCTACTTGTG 911597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449758176733760
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