Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_022059.1
Length=77367
Score E
Sequences producing significant alignments: (Bits) Value
seq1070 116 2e-21
>seq1070
Length=478823
Score = 116 bits (128), Expect = 2e-21
Identities = 455/705 (65%), Gaps = 29/705 (4%)
Strand=Plus/Plus
Query 67568 ATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGC 67627
|||||| | || ||||| || |||| || || || | || || ||||||| |||
Sbjct 111699 ATTCCCTCAGGTTCGATCACTTTGGATATAGCGCTGGGTGTAGGCGGATATCCGAAGGGT 111758
Query 67628 CGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCG 67687
|||| || || || ||||| || |||||||| || || | ||| || ||| || ||
Sbjct 111759 AGGGTTGTCGAAATATACGGCCCCGAGTCTTCGGGAAAAACGACGCTGGCCCTGCATGCA 111818
Query 67688 GTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTC 67747
| || | || ||||| || || || | ||| || | ||| || || ||||| || ||
Sbjct 111819 ATCGCGGAGGCGCAGAAAGCAGGAGGTATCGCTGCATTCATAGATGCGGAACACGCTTTC 111878
Query 67748 GACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCA 67807
|| | || ||| | || || || ||||||||||| || | | | ||| |||
Sbjct 111879 GATAGTTTTTATGCCCAGAAACTGGGCGTCGATGTCGACAACCTGCTTATAGCGCAACCA 111938
Query 67808 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCT--GGCGAGGTTT 67865
|||| || || ||||| ||||| || | || || ||| |||| ||||| |
Sbjct 111939 GACAACGGAGAACAGGCTCTGGAAATAGCGGATAACCTGATCAGGTCTTCGGCGA----T 111994
Query 67866 CCATCATCGTTGTG---GACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGG 67922
|| || || ||| ||||| || || || || ||| ||| || |||| || |
Sbjct 111995 AGAT-ATAGTGGTGATCGACTCGGTAGCCGCACTTACGCCCAAGGCCGAAATCGAGGGCG 112053
Query 67923 ACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGC 67982
| || || || ||| | | ||||| || || | || ||||| ||||| |||| ||
Sbjct 112054 ATATGGGAGAGTCGAAGATGGGCCTTCAGGCGAGACTCATGTCGCAGGCATTGCGTAAAT 112113
Query 67983 TGACCGGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGA 68042
| || || | || | ||||| ||| | | | | | |||||| ||||||| |
Sbjct 112114 TAACGGGGAGCATCAGTAAGACCAAAACGGTTTGCATTTTCATCAATCAGTTGCGCGACA 112173
Query 68043 AGATCGGCAACGTGGGCTACGG---CCCGAATGAGACCACCACCGGTGGTAAGGCTCTGC 68099
||||||| || | ||||| |||| || || || ||||||||||| || ||
Sbjct 112174 AGATCGG---AGTTGTTTACGGTAACCCG---GAAACAACAACCGGTGGTAATGCATTGA 112227
Query 68100 GCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAG----AAGGAAGGC 68155
|| ||||| || || || ||| |||| | | || |||| ||||| |||
Sbjct 112228 AGTTTTACGCAAGTGTACGCATAGATATCCG-AAAAGCG---TCGAGTATCAAGGACGGC 112283
Query 68156 GATGAGGCTG-TCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCC 68214
|| | | | |||| | || || || || || || |||||||| |||| || ||
Sbjct 112284 GA-CACACAGCTCGGGACACGGGCGAAGGTCAAAGTGGTAAAGAACAAAGTGGCCCCGCC 112342
Query 68215 GCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTC 68259
||| | || ||||| ||| | ||||| ||||| |||||
Sbjct 112343 TTTCCGTAAAGCCGAGTTCGACATAATGTACGGTGAGGGTATTTC 112387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 247374832484736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |