Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq1070 116 2e-21 >seq1070 Length=478823 Score = 116 bits (128), Expect = 2e-21 Identities = 455/705 (65%), Gaps = 29/705 (4%) Strand=Plus/Plus Query 67568 ATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGC 67627 |||||| | || ||||| || |||| || || || | || || ||||||| ||| Sbjct 111699 ATTCCCTCAGGTTCGATCACTTTGGATATAGCGCTGGGTGTAGGCGGATATCCGAAGGGT 111758 Query 67628 CGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCG 67687 |||| || || || ||||| || |||||||| || || | ||| || ||| || || Sbjct 111759 AGGGTTGTCGAAATATACGGCCCCGAGTCTTCGGGAAAAACGACGCTGGCCCTGCATGCA 111818 Query 67688 GTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTC 67747 | || | || ||||| || || || | ||| || | ||| || || ||||| || || Sbjct 111819 ATCGCGGAGGCGCAGAAAGCAGGAGGTATCGCTGCATTCATAGATGCGGAACACGCTTTC 111878 Query 67748 GACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCA 67807 || | || ||| | || || || ||||||||||| || | | | ||| ||| Sbjct 111879 GATAGTTTTTATGCCCAGAAACTGGGCGTCGATGTCGACAACCTGCTTATAGCGCAACCA 111938 Query 67808 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCT--GGCGAGGTTT 67865 |||| || || ||||| ||||| || | || || ||| |||| ||||| | Sbjct 111939 GACAACGGAGAACAGGCTCTGGAAATAGCGGATAACCTGATCAGGTCTTCGGCGA----T 111994 Query 67866 CCATCATCGTTGTG---GACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGG 67922 || || || ||| ||||| || || || || ||| ||| || |||| || | Sbjct 111995 AGAT-ATAGTGGTGATCGACTCGGTAGCCGCACTTACGCCCAAGGCCGAAATCGAGGGCG 112053 Query 67923 ACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGC 67982 | || || || ||| | | ||||| || || | || ||||| ||||| |||| || Sbjct 112054 ATATGGGAGAGTCGAAGATGGGCCTTCAGGCGAGACTCATGTCGCAGGCATTGCGTAAAT 112113 Query 67983 TGACCGGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGA 68042 | || || | || | ||||| ||| | | | | | |||||| ||||||| | Sbjct 112114 TAACGGGGAGCATCAGTAAGACCAAAACGGTTTGCATTTTCATCAATCAGTTGCGCGACA 112173 Query 68043 AGATCGGCAACGTGGGCTACGG---CCCGAATGAGACCACCACCGGTGGTAAGGCTCTGC 68099 ||||||| || | ||||| |||| || || || ||||||||||| || || Sbjct 112174 AGATCGG---AGTTGTTTACGGTAACCCG---GAAACAACAACCGGTGGTAATGCATTGA 112227 Query 68100 GCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAG----AAGGAAGGC 68155 || ||||| || || || ||| |||| | | || |||| ||||| ||| Sbjct 112228 AGTTTTACGCAAGTGTACGCATAGATATCCG-AAAAGCG---TCGAGTATCAAGGACGGC 112283 Query 68156 GATGAGGCTG-TCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCC 68214 || | | | |||| | || || || || || || |||||||| |||| || || Sbjct 112284 GA-CACACAGCTCGGGACACGGGCGAAGGTCAAAGTGGTAAAGAACAAAGTGGCCCCGCC 112342 Query 68215 GCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTC 68259 ||| | || ||||| ||| | ||||| ||||| ||||| Sbjct 112343 TTTCCGTAAAGCCGAGTTCGACATAATGTACGGTGAGGGTATTTC 112387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247374832484736