Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq95 161 2e-34 seq11107 93.3 7e-14 seq2441 93.3 7e-14 seq1599 93.3 7e-14 seq1352 93.3 7e-14 seq1210 93.3 7e-14 seq1191 93.3 7e-14 seq126 93.3 7e-14 seq2787 87.8 3e-12 seq1164 87.8 3e-12 seq558 84.2 4e-11 >seq95 Length=1800565 Score = 161 bits (178), Expect = 2e-34 Identities = 215/299 (72%), Gaps = 0/299 (0%) Strand=Plus/Plus Query 35442 GCTTTCGGACGGGTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAG 35501 ||||| || ||| |||||||| || || ||||||||||| || || || || || ||| Sbjct 533287 GCTTTAGGTAAGGTTACACCCGTTTGACCTTGGTATTTACCACCACGGTCTTTATAAGAG 533346 Query 35502 ATTTCGCAGTCCTCGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTAC 35561 ||||| ||| | || || ||| | || | |||||| || |||||||| || ||||| Sbjct 533347 ATTTCACAGACTTCATCTGACTCTAGGAATAACATCTGTGCTACACCTTCATTAGCGTAG 533406 Query 35562 ACACGCGCCGGCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCA 35621 | || |||| || ||||| || ||| || | || ||||||||||||||||| Sbjct 533407 ATTTTTGCAGGCAAATTAGTAGTATTTGAGAATTCTAAGGTTACATGACCTTCCCACTCT 533466 Query 35622 GGTTCCAGCGGCGTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAA 35681 || || ||||| || || || ||||| ||||| || || || || || |||||||| || Sbjct 533467 GGCTCTAGCGGAGTTACATTTACGATAATACCGCAACGAGCATAAGTACTCTTACCTAAG 533526 Query 35682 CACACCACGAGGACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAA 35740 || | || || || || ||||| ||||| ||||| || || || || || || || Sbjct 533527 CAAATGGTTAGTACATTACGTGGAATACGGAAATATTCAACAGTACGGGCAAGGGCAAA 533585 Score = 102 bits (112), Expect = 1e-16 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 120228 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGATC 120287 ||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| Sbjct 1125129 GCCGGTATAGCTCAGTCGGTAGAGCAACTGACTTGTAATCAGTAGGTCCCGAGTTCGACT 1125070 Query 120288 CCTGATGCCGGCACCATAT 120306 | || ||||||||||| || Sbjct 1125069 CTTGGTGCCGGCACCAGAT 1125051 >seq11107 Length=9879 Score = 93.3 bits (102), Expect = 7e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct 642 TTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAGTCCAAG 701 Query 122833 A 122833 | Sbjct 702 A 702 >seq2441 Length=2995558 Score = 93.3 bits (102), Expect = 7e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct 2499641 TTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAGTCCAAG 2499700 Query 122833 A 122833 | Sbjct 2499701 A 2499701 Score = 87.8 bits (96), Expect = 3e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct 2499544 TTAGCTCAGTCGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAGTCCAAG 2499603 Query 122833 A 122833 | Sbjct 2499604 A 2499604 >seq1599 Length=3738065 Score = 93.3 bits (102), Expect = 7e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct 70486 TTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAGTCCAAG 70545 Query 122833 A 122833 | Sbjct 70546 A 70546 Score = 93.3 bits (102), Expect = 7e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct 70583 TTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAGTCCAAG 70642 Query 122833 A 122833 | Sbjct 70643 A 70643 Score = 93.3 bits (102), Expect = 7e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct 3556007 TTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAGTCCAAG 3556066 Query 122833 A 122833 | Sbjct 3556067 A 3556067 >seq1352 Length=309740 Score = 93.3 bits (102), Expect = 7e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct 26610 TTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAGTCCAAG 26669 Query 122833 A 122833 | Sbjct 26670 A 26670 >seq1210 Length=1188399 Score = 93.3 bits (102), Expect = 7e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct 575875 TTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAGTCCAAG 575816 Query 122833 A 122833 | Sbjct 575815 A 575815 Score = 93.3 bits (102), Expect = 7e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct 575974 TTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAGTCCAAG 575915 Query 122833 A 122833 | Sbjct 575914 A 575914 >seq1191 Length=1801643 Score = 93.3 bits (102), Expect = 7e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct 1033869 TTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAGTCCAAG 1033928 Query 122833 A 122833 | Sbjct 1033929 A 1033929 >seq126 Length=3533043 Score = 93.3 bits (102), Expect = 7e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct 1686866 TTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAGTCCAAG 1686925 Query 122833 A 122833 | Sbjct 1686926 A 1686926 Score = 93.3 bits (102), Expect = 7e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct 1687001 TTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAGTCCAAG 1687060 Query 122833 A 122833 | Sbjct 1687061 A 1687061 >seq2787 Length=1710943 Score = 87.8 bits (96), Expect = 3e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct 894993 TTAGCTCAGTCGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAGTCCAAG 895052 Query 122833 A 122833 | Sbjct 895053 A 895053 Score = 87.8 bits (96), Expect = 3e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct 901356 TTAGCTCAGTCGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAGTCCAAG 901415 Query 122833 A 122833 | Sbjct 901416 A 901416 >seq1164 Length=549247 Score = 87.8 bits (96), Expect = 3e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||||| ||||||||||||||||| |||||||||||||||| |||||||| || || Sbjct 296230 TTAGCTCAGTCGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCGAGCCCAAG 296289 Query 122833 A 122833 | Sbjct 296290 A 296290 >seq558 Length=1588989 Score = 84.2 bits (92), Expect = 4e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 ||||||||||||||||||||| |||||| |||||||| ||||||| ||||| ||||| || Sbjct 559630 TTAGCTCAGTTGGTTAGAGCACCTGACTGTTAATCAGGGGGTCCTAGGTTCAAGTCCTAG 559571 Query 122833 A 122833 | Sbjct 559570 A 559570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825660848383680