Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1227 86.0 1e-10 >seq1227 Length=353457 Score = 86.0 bits (94), Expect = 1e-10 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 2076051 CGTGGTCTTTATGCTGTGGGGCCGCGACGCCCAGAGCAAGCGCAAGTTGATCGACCAGAA 2076110 ||| || |||||||||||||| ||||||||| ||| || | |||| | | Sbjct 83308 CGTAGTATTTATGCTGTGGGGATCGTACGCCCAGAAAAAGGGCGCCTATGTCGATCCGG- 83366 Query 2076111 CCGACACC-GCATCCTCGAAGCCGCCCACCCCTCGCCCAAGTCGGCCACCAACGGATTTT 2076169 |||||| | |||| ||| |||||| ||| |||||||| |||||| | |||||||| Sbjct 83367 CCGACAACTGCATTCTCAAAGCCGTCCATCCCTCGCCGCTGTCGGCATACCGCGGATTTT 83426 Query 2076170 TCGGCTGCCGGCACTTTTCGCAGGCCAACGCCTTTCTCG 2076208 |||| || || || || || || |||||| ||| ||||| Sbjct 83427 TCGGATGTCGCCATTTCTCACAAGCCAACTCCTATCTCG 83465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7913609161883688