Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_022330.1 Length=76586 Score E Sequences producing significant alignments: (Bits) Value seq1070 165 4e-36 >seq1070 Length=478823 Score = 165 bits (182), Expect = 4e-36 Identities = 525/799 (66%), Gaps = 29/799 (4%) Strand=Plus/Plus Query 66121 TGTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTA 66180 ||||| || |||||| | || || ||| || |||| || ||||| | || || || Sbjct 111689 TGTGGCGGTAATTCCCTCAGGTTCGATCACTTTGGATATAGCGCTGGGTGTAGGCGGATA 111748 Query 66181 CCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTG 66240 |||| ||| |||| || ||||| |||||||| || ||||| || || | || ||| Sbjct 111749 TCCGAAGGGTAGGGTTGTCGAAATATACGGCCCCGAGTCTTCGGGAAAAACGACGCTGGC 111808 Query 66241 TCTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGA 66300 || || || | || | |||||||| || || || | ||| || | ||| || || || Sbjct 111809 CCTGCATGCAATCGCGGAGGCGCAGAAAGCAGGAGGTATCGCTGCATTCATAGATGCGGA 111868 Query 66301 GCACTCCCTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGT 66360 ||| | | || || ||| || || || || || |||||||||| | | Sbjct 111869 ACACGCTTTCGATAGTTTTTATGCCCAGAAACTGGGCGTCGATGTCGACAACCTGCTTAT 111928 Query 66361 GGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCT-- 66418 | || || |||| || || ||||| ||||| || | || ||| ||| |||| Sbjct 111929 AGCGCAACCAGACAACGGAGAACAGGCTCTGGAAATAGCGGATAACCTGATCAGGTCTTC 111988 Query 66419 GGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTC 66478 ||||| | || || || | ||||| || || || || ||| ||||| || Sbjct 111989 GGCGATAGAT--ATAGTGGTGATCGACTCGGTAGCCGCACTTACGCCCAAGGCCGAAATC 112046 Query 66479 GAAGGCGACATCGGGGACAGTC--ACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCA 66536 || ||||| || |||| |||| | | ||||| || ||| | |||||||||||||| Sbjct 112047 GAGGGCGATAT--GGGAGAGTCGAAGATGGGCCTTCAGGCGAGACTCATGTCGCAGGCAT 112104 Query 66537 TGCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGT 66596 |||| || | || || | |||| | ||||| ||| | | | |||| |||| Sbjct 112105 TGCGTAAATTAACGGGGAGCATCAGTAAGACCAAAACGGTTTGCATTTTCATCAATCAGT 112164 Query 66597 TGCGCGAGAAGATCGGCAACGTGGGCTACGG---CCCGAATGAGACCACCACGGGCGGAA 66653 ||||||| |||||||| || | ||||| |||| || || || || || || | Sbjct 112165 TGCGCGACAAGATCGG---AGTTGTTTACGGTAACCCG---GAAACAACAACCGGTGGTA 112218 Query 66654 AGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCG--TCGCATCGCCACCGAGAA 66711 | || |||| ||| ||||| || ||||| ||| |||| || ||| | || Sbjct 112219 ATGCATTGAAGTTTTACGCAAGTGTACGCATAGATATCCGAAAAGCGTCG--AGTATCAA 112276 Query 66712 GGAAGGCGATGAGGCTG-TCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGG 66770 ||| ||||| | | | |||| | || | ||| ||||| || |||||||| ||| Sbjct 112277 GGACGGCGA-CACACAGCTCGGGACACGGGCGAAGGTCAAAGTGGTAAAGAACAAAGTGG 112335 Query 66771 CCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCG-CGTGAG 66829 ||||||| ||| || ||||||||| | | ||||||| ||||| || ||| | || Sbjct 112336 CCCCGCCTTTCCGTAAAGCCGAGTTCGACATAATGTACGGTGAGGGTATTTCGAAGATAG 112395 Query 66830 GTCGAACTCCTCGACCTGGCCGTGTCG--CAGGGCCTGGTGAAGAAGTCGGGCGCCTGGT 66887 | ||| || | ||||| | |||||| | | | | | |||||| ||| | |||| Sbjct 112396 G-CGAGATCATAGACCTTG--GTGTCGACCTGAACGTAATAAAGAAGAGCGGCTCTTGGT 112452 Query 66888 TCAAGTACGGGGACAAGAA 66906 || ||||||||| | ||| Sbjct 112453 TCTCGTACGGGGAAATGAA 112471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244876387624264