Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 98.7 6e-16
seq783 95.1 8e-15
>seq2315
Length=138946
Score = 98.7 bits (108), Expect = 6e-16
Identities = 137/190 (72%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849
|| |||||||||||||| || || |||| |||| ||||| || || || ||||| |||
Sbjct 26965 TTTTGAATGTTATAGTCTGAAAGTGTGCGTCCATCTTCCAGCTGTTTCCCTGCGAAAATC 26906
Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909
| || ||||| || | || | |||||| ||||| | |||||| ||| || || ||
Sbjct 26905 AATCTCTGCTGATCAGGAGGAATCCCCTCTTTGTCTTGAATTTTTGCTTTTAC--ATTCT 26848
Query 34910 --ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
|| | ||| | || || |||| ||||||||| || || || || || || ||||
Sbjct 26847 CAATGGTATCAGATGGTTCCACCTCAAGGGTTATGGTTTTACCAGTAAGAGTTTTCACAA 26788
Query 34968 AGATCTGCAT 34977
| ||||||||
Sbjct 26787 AAATCTGCAT 26778
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
|||| ||||| || |||||||| || |||| |||| |||| || ||||| || || |
Sbjct 29150 CCTTTTGAATATTGTAGTCCGACAGTGTGCGGCCATCTTCCAACTGTTTTCCTGCAAAAA 29091
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
| | ||| ||||||||| | || | || || ||||| | || ||| || || |
Sbjct 29090 TTAATCGCTGCTGGTCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTT 29031
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| || | ||| | || || || | || ||||| ||||| ||||||||||| ||||
Sbjct 29030 CAATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAA 28971
Query 34968 AGATCTGCATG 34978
| |||||||||
Sbjct 28970 ATATCTGCATG 28960
Score = 82.4 bits (90), Expect = 5e-11
Identities = 132/190 (69%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
|||| ||||| || |||||||| || |||| |||| |||| || || || || || |
Sbjct 27709 CCTTTTGAATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAA 27650
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
| | ||| ||||| ||| | || | || || ||||| | || ||| || || |
Sbjct 27649 TTAATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTT 27590
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| || | ||| | || || || | || ||||| ||||| ||||||||||| ||||
Sbjct 27589 CAATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAA 27530
Query 34968 AGATCTGCAT 34977
| ||||||||
Sbjct 27529 ATATCTGCAT 27520
>seq783
Length=580412
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||| | || || |||| ||| | ||| |||||||||||||| ||||| ||
Sbjct 391351 CCACCCCTGAGTCTAAGCACCAAGTGGAGAGTGGATTCCTTCTGAATGTTGTAGTCAGAC 391292
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| | || |||| || ||||| || || || ||||| || || ||||| ||| | ||
Sbjct 391291 AGGGTTCGTCCATCTTCAAGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGA 391232
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| |||||||| || | ||||| ||| || | | || | || ||||| ||
Sbjct 391231 ATGCCCTCCTTATCCTGAATTTTGGCTTTCACATTTTCGATTGTGTCTGAAGCCTCAACT 391172
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || ||||| || || || | ||||| || || ||||||||
Sbjct 391171 TCCAAAGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAAATCTGCAT 391125
Score = 86.0 bits (94), Expect = 4e-12
Identities = 136/193 (70%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|| ||||||||||| || || || || | || | || || || ||||| || || |||
Sbjct 390319 TCTTTCTGAATGTTGTAATCTGAAAGAGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAG 390260
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| || || |||||| | || | || |||||||| | ||||| |||||| ||
Sbjct 390259 ATCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATTTTGGCTTTGAC--AT 390202
Query 34907 GCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964
|| |||| || |||||||| || | || || || || || || || || ||||
Sbjct 390201 TCTCGATCGTATCCGAAGCCTCGACTTCCAAAGTAATAGTTTTCCCGGTAAGAGTTTTTA 390142
Query 34965 CAAAGATCTGCAT 34977
|||| ||||||||
Sbjct 390141 CAAAAATCTGCAT 390129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325594391106248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |