Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_022976.1 Length=75894 Score E Sequences producing significant alignments: (Bits) Value seq1070 168 3e-37 >seq1070 Length=478823 Score = 168 bits (186), Expect = 3e-37 Identities = 533/811 (66%), Gaps = 29/811 (4%) Strand=Plus/Plus Query 66078 TGTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTA 66137 ||||| || |||||| | || || ||| || |||| || ||||| | || || || Sbjct 111689 TGTGGCGGTAATTCCCTCAGGTTCGATCACTTTGGATATAGCGCTGGGTGTAGGCGGATA 111748 Query 66138 CCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTG 66197 |||| ||| |||| || ||||| |||||||| || ||||| || || | || ||| Sbjct 111749 TCCGAAGGGTAGGGTTGTCGAAATATACGGCCCCGAGTCTTCGGGAAAAACGACGCTGGC 111808 Query 66198 TCTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGA 66257 || || || | || | |||||||| || || || | ||| || | ||| || || || Sbjct 111809 CCTGCATGCAATCGCGGAGGCGCAGAAAGCAGGAGGTATCGCTGCATTCATAGATGCGGA 111868 Query 66258 GCACTCCCTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGT 66317 ||| | | || || ||| || || || || || |||||||||| | | Sbjct 111869 ACACGCTTTCGATAGTTTTTATGCCCAGAAACTGGGCGTCGATGTCGACAACCTGCTTAT 111928 Query 66318 GGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCT-- 66375 | || || |||| || || ||||| ||||| || | || ||| ||| |||| Sbjct 111929 AGCGCAACCAGACAACGGAGAACAGGCTCTGGAAATAGCGGATAACCTGATCAGGTCTTC 111988 Query 66376 GGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTC 66435 ||||| | || || || | ||||| || || || || ||| ||||| || Sbjct 111989 GGCGATAGAT--ATAGTGGTGATCGACTCGGTAGCCGCACTTACGCCCAAGGCCGAAATC 112046 Query 66436 GAAGGCGACATCGGGGACAGTC--ACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCA 66493 || ||||| || |||| |||| | | ||||| || ||| | |||||||||||||| Sbjct 112047 GAGGGCGATAT--GGGAGAGTCGAAGATGGGCCTTCAGGCGAGACTCATGTCGCAGGCAT 112104 Query 66494 TGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGT 66553 |||| || | || || | |||| | ||||| ||| | | | |||| |||| Sbjct 112105 TGCGTAAATTAACGGGGAGCATCAGTAAGACCAAAACGGTTTGCATTTTCATCAATCAGT 112164 Query 66554 TGCGCGAGAAGATCGGCAACGTGGGCTACGG---CCCGAATGAGACCACCACGGGCGGAA 66610 ||||||| |||||||| || | ||||| |||| || || || || || || | Sbjct 112165 TGCGCGACAAGATCGG---AGTTGTTTACGGTAACCCG---GAAACAACAACCGGTGGTA 112218 Query 66611 AGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCG--TCGCATCGCCACCGAGAA 66668 | || |||| ||| ||||| || ||||| ||| |||| || ||| | || Sbjct 112219 ATGCATTGAAGTTTTACGCAAGTGTACGCATAGATATCCGAAAAGCGTCG--AGTATCAA 112276 Query 66669 GGAAGGCGATGAGGCTG-TCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGG 66727 ||| ||||| | | | |||| | || | ||| ||||| || |||||||| ||| Sbjct 112277 GGACGGCGA-CACACAGCTCGGGACACGGGCGAAGGTCAAAGTGGTAAAGAACAAAGTGG 112335 Query 66728 CCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCG-CGTGAG 66786 ||||||| ||| || ||||||||| | | ||||||| ||||| || ||| | || Sbjct 112336 CCCCGCCTTTCCGTAAAGCCGAGTTCGACATAATGTACGGTGAGGGTATTTCGAAGATAG 112395 Query 66787 GTCGAACTCCTCGACCTGGCCGTGTCG--CAGGGCCTGGTGAAGAAGTCGGGCGCCTGGT 66844 | ||| || | ||||| | |||||| | | | | | |||||| ||| | |||| Sbjct 112396 G-CGAGATCATAGACCTTG--GTGTCGACCTGAACGTAATAAAGAAGAGCGGCTCTTGGT 112452 Query 66845 TCAAGTACGGGGACAAGAACGTCGCCCAGGG 66875 || ||||||||| | ||| | | |||||| Sbjct 112453 TCTCGTACGGGGAAATGAAATTGGGCCAGGG 112483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242662656710760