Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_022988.1
Length=74210
Score E
Sequences producing significant alignments: (Bits) Value
seq1070 168 3e-37
>seq1070
Length=478823
Score = 168 bits (186), Expect = 3e-37
Identities = 533/811 (66%), Gaps = 29/811 (4%)
Strand=Plus/Plus
Query 64667 TGTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTA 64726
||||| || |||||| | || || ||| || |||| || ||||| | || || ||
Sbjct 111689 TGTGGCGGTAATTCCCTCAGGTTCGATCACTTTGGATATAGCGCTGGGTGTAGGCGGATA 111748
Query 64727 CCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTG 64786
|||| ||| |||| || ||||| |||||||| || ||||| || || | || |||
Sbjct 111749 TCCGAAGGGTAGGGTTGTCGAAATATACGGCCCCGAGTCTTCGGGAAAAACGACGCTGGC 111808
Query 64787 TCTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGA 64846
|| || || | || | |||||||| || || || | ||| || | ||| || || ||
Sbjct 111809 CCTGCATGCAATCGCGGAGGCGCAGAAAGCAGGAGGTATCGCTGCATTCATAGATGCGGA 111868
Query 64847 GCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGT 64906
||| | | || | || ||| || || || || || |||||||||| | |
Sbjct 111869 ACACGCTTTCGATAGTTTTTATGCCCAGAAACTGGGCGTCGATGTCGACAACCTGCTTAT 111928
Query 64907 GGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCT-- 64964
| || || |||| || || ||||| ||||| || | || ||| ||| ||||
Sbjct 111929 AGCGCAACCAGACAACGGAGAACAGGCTCTGGAAATAGCGGATAACCTGATCAGGTCTTC 111988
Query 64965 GGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTC 65024
||||| | || || || | ||||| || || || || ||| ||||| ||
Sbjct 111989 GGCGATAGAT--ATAGTGGTGATCGACTCGGTAGCCGCACTTACGCCCAAGGCCGAAATC 112046
Query 65025 GAAGGCGACATCGGGGACAGTC--ACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCA 65082
|| ||||| || |||| |||| | | ||||| || ||| | ||||||||||||||
Sbjct 112047 GAGGGCGATAT--GGGAGAGTCGAAGATGGGCCTTCAGGCGAGACTCATGTCGCAGGCAT 112104
Query 65083 TGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGT 65142
|||| || | || || | |||| | ||||| ||| | | | |||| ||||
Sbjct 112105 TGCGTAAATTAACGGGGAGCATCAGTAAGACCAAAACGGTTTGCATTTTCATCAATCAGT 112164
Query 65143 TGCGCGAGAAGATCGGCAACGTGGGCTACGG---CCCGAATGAGACCACCACGGGCGGCA 65199
||||||| |||||||| || | ||||| |||| || || || || || || |
Sbjct 112165 TGCGCGACAAGATCGG---AGTTGTTTACGGTAACCCG---GAAACAACAACCGGTGGTA 112218
Query 65200 AGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCG--TCGCATCGCCACCGAGAA 65257
| || |||| ||| ||||| || ||||| ||| |||| || ||| | ||
Sbjct 112219 ATGCATTGAAGTTTTACGCAAGTGTACGCATAGATATCCGAAAAGCGTCG--AGTATCAA 112276
Query 65258 GGAAGGCGATGAGGCTG-TCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGG 65316
||| ||||| | | | |||| | || | ||| || || || |||||||| |||
Sbjct 112277 GGACGGCGA-CACACAGCTCGGGACACGGGCGAAGGTCAAAGTGGTAAAGAACAAAGTGG 112335
Query 65317 CCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCG-CGTGAG 65375
||||||| ||| || ||||||||| | | ||||||| ||||| || ||| | ||
Sbjct 112336 CCCCGCCTTTCCGTAAAGCCGAGTTCGACATAATGTACGGTGAGGGTATTTCGAAGATAG 112395
Query 65376 GTCGAACTCCTCGACCTGGCCGTGTCG--CAGGGCCTGGTGAAGAAGTCGGGCGCCTGGT 65433
| ||| || | ||||| | |||||| | | | | | |||||| ||| | ||||
Sbjct 112396 G-CGAGATCATAGACCTTG--GTGTCGACCTGAACGTAATAAAGAAGAGCGGCTCTTGGT 112452
Query 65434 TCAAGTACGGGGACAAGAACGTCGCCCAGGG 65464
|| ||||||||| | ||| | | ||||||
Sbjct 112453 TCTCGTACGGGGAAATGAAATTGGGCCAGGG 112483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 237275484950152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |