Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_023006.1
Length=43564
Score E
Sequences producing significant alignments: (Bits) Value
seq1615 95.1 3e-15
seq95 91.5 4e-14
seq4222 87.8 5e-13
seq1787 82.4 2e-11
>seq1615
Length=177996
Score = 95.1 bits (104), Expect = 3e-15
Identities = 80/97 (82%), Gaps = 1/97 (1%)
Strand=Plus/Plus
Query 13550 ATGCCGGCCTTTTTGCCGTTATTGGTATCACCTACGGCGCAGGCGACGGCAGCACCACTT 13609
||||| ||| |||||||||||||| | |||||| ||||| ||||||||||||| ||| |
Sbjct 7708 ATGCCAACCTGTTTGCCGTTATTGGCACCACCTATGGCGCGGGCGACGGCAGCAGCACCT 7767
Query 13610 TCAACCTTCCAGACCTGCGTGGCCGCGTTCCGGCTGG 13646
| ||||| || ||||||| || ||| |||| |||||
Sbjct 7768 TTAACCTGCCTGACCTGCAGGGACGCTTTCC-GCTGG 7803
>seq95
Length=1800565
Score = 91.5 bits (100), Expect = 4e-14
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 21062 ATGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATC 21121
|||||| |||| ||||||||||||||| |||| ||||||||||||| |||||||||
Sbjct 1258696 ATGGCGCGCCCGGCAGGATTCGAACCTGCGACCACCCGCTTAGAAGGCGGGTGCTCTATC 1258637
Query 21122 CAGCTGAGCTACGGG 21136
|| ||||||||||||
Sbjct 1258636 CAACTGAGCTACGGG 1258622
>seq4222
Length=21366
Score = 87.8 bits (96), Expect = 5e-13
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 21067 GACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATCCAGCT 21126
|| ||||||||||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct 17820 GATCCCGACAGGATTCGAACCTGTGACCCACAGCTTAGAAGGCTGTTGCTCTATCCAACT 17761
Query 21127 GAGCTACGGGGCC 21139
|||||||||| ||
Sbjct 17760 GAGCTACGGGACC 17748
>seq1787
Length=238445
Score = 82.4 bits (90), Expect = 2e-11
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand=Plus/Plus
Query 21070 CCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATCCAGCTGAG 21129
||||||||||||||||||||||||| || | ||| ||| | ||||||||| ||| |||||
Sbjct 64672 CCCGACAGGATTCGAACCTGTGACCCTTTGATTAAAAGTCAAATGCTCTA-CCAACTGAG 64730
Query 21130 CTACGGG 21136
|||||||
Sbjct 64731 CTACGGG 64737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 139242194329504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |