Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq1615 95.1 3e-15 seq95 91.5 4e-14 seq4222 87.8 5e-13 seq1787 82.4 2e-11 >seq1615 Length=177996 Score = 95.1 bits (104), Expect = 3e-15 Identities = 80/97 (82%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 13550 ATGCCGGCCTTTTTGCCGTTATTGGTATCACCTACGGCGCAGGCGACGGCAGCACCACTT 13609 ||||| ||| |||||||||||||| | |||||| ||||| ||||||||||||| ||| | Sbjct 7708 ATGCCAACCTGTTTGCCGTTATTGGCACCACCTATGGCGCGGGCGACGGCAGCAGCACCT 7767 Query 13610 TCAACCTTCCAGACCTGCGTGGCCGCGTTCCGGCTGG 13646 | ||||| || ||||||| || ||| |||| ||||| Sbjct 7768 TTAACCTGCCTGACCTGCAGGGACGCTTTCC-GCTGG 7803 >seq95 Length=1800565 Score = 91.5 bits (100), Expect = 4e-14 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 21062 ATGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATC 21121 |||||| |||| ||||||||||||||| |||| ||||||||||||| ||||||||| Sbjct 1258696 ATGGCGCGCCCGGCAGGATTCGAACCTGCGACCACCCGCTTAGAAGGCGGGTGCTCTATC 1258637 Query 21122 CAGCTGAGCTACGGG 21136 || |||||||||||| Sbjct 1258636 CAACTGAGCTACGGG 1258622 >seq4222 Length=21366 Score = 87.8 bits (96), Expect = 5e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 21067 GACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATCCAGCT 21126 || ||||||||||||||||||||||||| ||||||||||| ||||||||||| || Sbjct 17820 GATCCCGACAGGATTCGAACCTGTGACCCACAGCTTAGAAGGCTGTTGCTCTATCCAACT 17761 Query 21127 GAGCTACGGGGCC 21139 |||||||||| || Sbjct 17760 GAGCTACGGGACC 17748 >seq1787 Length=238445 Score = 82.4 bits (90), Expect = 2e-11 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 21070 CCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATCCAGCTGAG 21129 ||||||||||||||||||||||||| || | ||| ||| | ||||||||| ||| ||||| Sbjct 64672 CCCGACAGGATTCGAACCTGTGACCCTTTGATTAAAAGTCAAATGCTCTA-CCAACTGAG 64730 Query 21130 CTACGGG 21136 ||||||| Sbjct 64731 CTACGGG 64737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139242194329504