Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 152 4e-32
seq783 136 3e-27
seq242 120 2e-22
seq1551 84.2 2e-11
>seq2315
Length=138946
Score = 152 bits (168), Expect = 4e-32
Identities = 150/191 (79%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656
|||||||||||||||| || | || ||||| ||| || || ||||| || || | |
Sbjct 26967 CTTTTTGAATGTTATAGTCTGAAAGTGTGCGTCCATCTTCCAGCTGTTTCCCTGCGAAAA 26908
Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTT 29715
||||||| |||||||| || ||||| |||||||||||||| |||||||| ||| ||| |
Sbjct 26907 TCAATCTCTGCTGATCAGGAGGAATCCCCTCTTTGTCTTG-AATTTTTGCTTTTACATTC 26849
Query 29716 TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACA 29775
|| | || ||||| |||| || ||||| ||||| ||||| ||||| | ||||| |||
Sbjct 26848 TCAATGGTATCAGATGGTTCCACCTCAAGGGTTATGGTTTTACCAGTAAGAGTTTTCACA 26789
Query 29776 AATATCTGCAT 29786
|| ||||||||
Sbjct 26788 AAAATCTGCAT 26778
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | || ||| || |||||||| || || || ||||| ||||| || ||||| | |
Sbjct 33219 CCACCTCGCAGACGGAGAACCAAATGCAGAGTAGACTCTTTCTGAATATTGTAATCTGAA 33160
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| ||||| |||||||||||| | || | ||| ||||| || || ||
Sbjct 33159 AGTGTGCGACCATCCTCGAGCTGTTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGAGGG 33100
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| ||||| || ||||| ||| |||| ||| ||| | || | || || ||| |||| ||
Sbjct 33099 ATTCCCTCCTTATCTTG-AATCTTTGCTTTTACATTCTCAATGGTATCTGAAGGTTCCAC 33041
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| | || || || || || || ||||| || ||||| ||||||||
Sbjct 33040 TTCCAATGTAATTGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCAT 32993
Score = 132 bits (146), Expect = 4e-26
Identities = 144/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656
||||||| ||||| ||||| | | ||||| ||| || || || || |||||| | |
Sbjct 27320 CTTTTTGTATGTTGTAATCAGACAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGA 27261
Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTT 29716
| | |||||||||||| || |||||||| || |||||||||| ||| ||| ||| |||
Sbjct 27260 TAAGTCTTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGTATCTTTGCTTTTACATTTT 27201
Query 29717 CTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAA 29776
| | || ||||| |||| ||||| | || |||||||| ||||| || || ||||| |
Sbjct 27200 CAATTGTATCAGATGGTTCCACTTCCAAGGTGATAGTTTTTCCAGTCAAAGTCTTAACGA 27141
Query 29777 ATATCTGCATT 29787
| || ||||||
Sbjct 27140 AGATTTGCATT 27130
Score = 131 bits (144), Expect = 1e-25
Identities = 145/191 (76%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656
||||||| || || || |||| | |||||| ||| || | |||||||| ||| | |
Sbjct 28211 CTTTTTGGATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAA 28152
Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTT 29715
| |||| |||||||| || || || || ||||||||||| |||||||| || ||| ||
Sbjct 28151 TTAATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTG-AATTTTTGCCTTTACATTT 28093
Query 29716 TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACA 29775
|| | || ||||| ||||||| || || || || |||||||| || | ||| || |||
Sbjct 28092 TCAATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTGCCTGTGAGGGTCTTCACA 28033
Query 29776 AATATCTGCAT 29786
|||||||||||
Sbjct 28032 AATATCTGCAT 28022
Score = 122 bits (134), Expect = 7e-23
Identities = 142/189 (75%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 29599 TTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATC 29658
|||||||| || || |||| | |||||| ||| || | |||||||| ||| | ||
Sbjct 27707 TTTTGAATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAATT 27648
Query 29659 AATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTC 29717
|||| |||||||| || || || || ||||||||||| ||| |||| || ||| ||||
Sbjct 27647 AATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTG-AATCTTTGCCTTTACATTTTC 27589
Query 29718 TACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
| || ||||| ||||||| || || || || ||||| || || | ||| || |||||
Sbjct 27588 AATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAA 27529
Query 29778 TATCTGCAT 29786
|||||||||
Sbjct 27528 TATCTGCAT 27520
Score = 109 bits (120), Expect = 4e-19
Identities = 139/189 (74%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 29599 TTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATC 29658
|||||||| || || |||| | ||||| ||| || | ||||| || ||| | ||
Sbjct 29148 TTTTGAATATTGTAGTCCGACAGTGTGCGGCCATCTTCCAACTGTTTTCCTGCAAAAATT 29089
Query 29659 AATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTC 29717
|||| ||||| || || || || || ||||||||||| ||| |||| || ||| ||||
Sbjct 29088 AATCGCTGCTGGTCTGGTGGGATTCCTTCTTTGTCTTG-AATCTTTGCCTTTACATTTTC 29030
Query 29718 TACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
| || ||||| ||||||| || || || || ||||| || || | ||| || |||||
Sbjct 29029 AATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAA 28970
Query 29778 TATCTGCAT 29786
|||||||||
Sbjct 28969 TATCTGCAT 28961
>seq783
Length=580412
Score = 136 bits (150), Expect = 3e-27
Identities = 162/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|||| ||| | |||||| || ||||||||||||||||| || || | | ||| || |
Sbjct 390115 CGCAACACAAGATGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGACAGGGTTCGTCCA 390056
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || || || ||||| ||| | |||||||| || || || || ||||| || || ||
Sbjct 390055 TCTTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTA 389996
Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|| || ||| || | ||||||| |||| | ||||| || || ||||| ||||| ||
Sbjct 389995 TCCTG-AATCTTGGCTTTGACATTTTCGATTGTGTCTGAGGCCTCAACTTCTAGAGTGAT 389937
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||||||||||| | || || ||||| |||||||||
Sbjct 389936 GGTTTTGCCAGTAAGAGTCTTCACAAAAATCTGCATT 389900
Score = 136 bits (150), Expect = 3e-27
Identities = 171/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 29556 TTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC 29615
||| || ||||| | | |||||||| || || |||||||| || |||||||| || ||
Sbjct 391355 TTGGCCACCCCTGAGTCTAAGCACCAAGTGGAGAGTGGATTCCTTCTGAATGTTGTAGTC 391296
Query 29616 CGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGG 29675
| | ||| || ||| || |||||||| |||||| | || | | |||||||| ||
Sbjct 391295 AGACAGGGTTCGTCCATCTTCAAGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGG 391236
Query 29676 CGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTT 29734
||||| ||||| || || || |||||| | ||| ||| |||| | ||||| ||| |
Sbjct 391235 AGGAATGCCCTCCTTATCCTG-AATTTTGGCTTTCACATTTTCGATTGTGTCTGAAGCCT 391177
Query 29735 CTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| ||||| | ||| || ||||||||||| || || || || || ||||||||
Sbjct 391176 CAACTTCCAAAGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAAATCTGCAT 391125
Score = 95.1 bits (104), Expect = 9e-15
Identities = 116/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || | ||||||||||||| | || ||||| || || || || ||||| |||||||||
Sbjct 387212 TCTTCCAATTGTTTGCCAGCAAAGATTAATCTCTGTTGGTCTGGAGGAATTCCCTCTTTG 387153
Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||||| ||| || | || || | || | || || ||| ||| ||||| || || ||
Sbjct 387152 TCTTG-AATCTTAGCCTTCACGTTCTCAATGGTATCTGAAGCTTCAACTTCTAGGGTGAT 387094
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||||| || || | ||| || || || ||||||||
Sbjct 387093 AGTTTTCCCTGTCAGGGTCTTCACGAAAATCTGCAT 387058
>seq242
Length=1788442
Score = 120 bits (132), Expect = 2e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656
|||| ||||| |||||||| | | || || ||| || || || || |||||| | |
Sbjct 1569966 CTTTCTGAATATTATAATCAGAGAGTGTTCGTCCATCCTCTAGCTGCTTTCCAGCAAAAA 1569907
Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTT 29716
||||||| || ||||| || || || || || |||||||| | ||| ||| ||| |||
Sbjct 1569906 TCAATCTCTGTTGATCAGGAGGGATGCCTTCCTTGTCTTGGATTTTGGCTTTCACATTTT 1569847
Query 29717 CTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAA 29776
| | ||| ||||| ||| || || || || || ||||| || ||||| ||||| || |
Sbjct 1569846 CAATAGTATCAGAGGCTTCAACCTCGAGGGTAATTGTTTTACCCGTTAAAGTTTTCACGA 1569787
Query 29777 ATATCTGCATT 29787
|||||||||||
Sbjct 1569786 ATATCTGCATT 1569776
>seq1551
Length=444118
Score = 84.2 bits (92), Expect = 2e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697
|||||||| |||||| | || | | |||||||| || || || ||| | || || ||
Sbjct 25191 AGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGTATGCCCGCCTTATCCTGG 25250
Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757
| ||| ||| ||| |||| | ||||| ||| || ||||| | ||| || ||||||
Sbjct 25251 ATTTTGGCTTTTACATTTTCGATTGTGTCTGAAGCCTCAACTTCCAAAGTGATGGTTTTG 25310
Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || || ||||||||
Sbjct 25311 CCAGTCAAAGTCTTGACGAAAATCTGCAT 25339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385102805055672
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