Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_023499.1 Length=42906 Score E Sequences producing significant alignments: (Bits) Value seq6928 132 1e-26 >seq6928 Length=39225 Score = 132 bits (146), Expect = 1e-26 Identities = 268/395 (68%), Gaps = 2/395 (1%) Strand=Plus/Minus Query 28104 TTACGCGTGCAATGGGTGATGCAGGTATTGAAGCTGATGAGTATCAAAGTGTACTTGATA 28163 |||| ||||| ||||| ||||| | ||| | || |||| ||| | ||| | |||| Sbjct 11146 TTACCCGTGCTATGGGGGATGCTGAGATTAATGCCAATGAATATGGTACTGTCTTGGATA 11087 Query 28164 TGGTAGCGAAAGCAGCACAGGCTAGCGGTATAAGTGTTGATACATTAGCTGATAGCATTA 28223 || | | ||| || || ||||| | ||||| ||||| | | | | Sbjct 11086 TGCTGACCGTAGCGGCGCAAAAGAGCGGGGTTTCAATTGATTCATTAACCGGAAATCTGG 11027 Query 28224 CTAAATACGGTGCTCCAATGAGGGCTATGGGCTTTGAGATGAAAGAATCAATCGCTTTAT 28283 | ||||| || || || ||| | || | || |||| | | || ||||| || | | Sbjct 11026 CGAAATATGGCGCGCCTATGCGTGCGCTTGGGCTTGATACGCAAACTTCAATTGCGATGT 10967 Query 28284 TCTCTCAATGGGAGAAATCAGGTGTTAATACTGAAATAGCCTTCAGTGGTTTGAAAAAAG 28343 | | |||||| ||| | |||||||||||||| || || ||||| || ||||||| | Sbjct 10966 TTGCCGGATGGGAAAAAGCGGGTGTTAATACTGAGATTGCATTCAGCGGGATGAAAAAGG 10907 Query 28344 CTATATCCAATTGGGGTAAAGCTGGTAAAAACCCAAGAGAAGAATTTAAGAAGACATTAG 28403 | || ||||| ||||| ||||| ||| || | || | |||||| || ||| | | Sbjct 10906 CAATTTCCAACTGGGGAGCCGCTGGAAAAGACGCGAGTGTAGAATTCGGAAAAACAAT-G 10848 Query 28404 CAGAAATTGAAA-AGACGCCGGATATAGCTAGCGCAACTAGTTTAGCGATTGAAGCATTT 28462 ||| | | || | |||||||||| || | || || ||| | ||||||||||||||| Sbjct 10847 CAGCAGATCAAGGATGCGCCGGATATTGCAACAGCGACCAGTATGGCGATTGAAGCATTT 10788 Query 28463 GGTGCAAAAGCAGGTCCTGATTTAGCAGATGCTAT 28497 || || ||||| || || |||||||| || ||||| Sbjct 10787 GGAGCGAAAGCCGGCCCCGATTTAGCGGACGCTAT 10753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137137214228672