Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq373 93.3 7e-14 >seq373 Length=1274844 Score = 93.3 bits (102), Expect = 7e-14 Identities = 127/176 (72%), Gaps = 1/176 (1%) Strand=Plus/Plus Query 44621 CCTTTCATCTTCAAACACCTAGCCGTGATGCCTGATGTACACTGGGGAATGGGCGCGACC 44680 ||||| ||||| ||||| | || || ||||||||||| || | || | || | || Sbjct 1232631 CCTTT-ATCTTTAAACATATTGCAGTAATGCCTGATGTGCATTTAGGCAAAGGTTCTACT 1232689 Query 44681 ATTGGTTCGGTTATTGCGACTAAAGGTGCGATTATTCCTGCCGCAGTGGGTGTTGATATT 44740 || ||| || ||| | || |||||||||||| ||||| || || || || ||||| Sbjct 1232690 ATCGGTAGTGTGATTCCTACCGTAGGTGCGATTATCCCTGCGGCGGTAGGGGTAGATATC 1232749 Query 44741 GGTTGTGGGATGATTGCCCAACAAACCTCGCTGGTTGCTGCTGACCTGCCCGATAA 44796 |||||||||||||| || || |||||| | | ||| |||||| || ||||| Sbjct 1232750 GGTTGTGGGATGATGGCAGCACGTACCTCGTTAATGGCTAGTGACCTACCAGATAA 1232805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 867072011086080