Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq2797 109 2e-19 seq2029 104 7e-18 >seq2797 Length=50669 Score = 109 bits (120), Expect = 2e-19 Identities = 160/222 (72%), Gaps = 11/222 (5%) Strand=Plus/Plus Query 1096 ACTGACGGTGAGCCATTCTGGTTCGTGTTCGGGAACCCCACAAGGAACACAGGTCGATTC 1155 |||||||| | |||| ||| | |||||||| ||||| || ||||| || || || || Sbjct 33282 ACTGACGGCG--CCATG-TGGATGGTGTTCGGCAACCCGACCAGGAATACCGGCCGCTTT 33338 Query 1156 CGGGAGTGCTGGCGTAAGTTCCGCCATCGCTGGAAGACCAGGCAGATCGATAGTCGATCG 1215 |||||||||| | || ||||||||||||||||| ||| | |||||||| ||| || Sbjct 33339 CGGGAGTGCTTCGGCAAATTCCGCCATCGCTGGAATACCCGAAAGATCGAT--TCG--CG 33394 Query 1216 GCCAAG----ATGACCAACAAAGACCTAATCAAGCAATGGGCCGCGGACTACGGCGAAGA 1271 || | ||| |||||| | | | |||| ||| || ||||||||||| || Sbjct 33395 CACATGCGTTATGGTCAACAAGCAGCAGGTTGAGCAGTGGCTGGCCGACTACGGCGAGGA 33454 Query 1272 CTCCGACTTCTTCAAGGTACGTGTTCGCGGTCTGTTCCCCTC 1313 ||| ||||| |||||||| || || | || |||||||| Sbjct 33455 CTCGGACTTTTTCAAGGTGCGCGTCAGGGGCGAATTCCCCTC 33496 >seq2029 Length=231691 Score = 104 bits (114), Expect = 7e-18 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 30191 TGCCCGACGATCTCCGCCAACTTCCCGAAGAACACCACGCGGTGCCATTCGGTGCGCTCC 30250 ||||| ||||| || || ||||| || ||||| || ||||||||||||||||| || ||| Sbjct 11584 TGCCCAACGATTTCAGCTAACTTACCAAAGAATACTACGCGGTGCCATTCGGTACGTTCC 11643 Query 30251 TGTTGCTGGCCGGTCTGCTTGTCCTTCCAGCTCTCGCTGGTGGCGAGGGTGA-TGTTGGT 30309 ||||| | || || | || || ||||| || ||||| | | | |||| | Sbjct 11644 TGTTGTTCACCAGTATTTTTATCTTTCCATGCGTCAGAAGTGGCTAAAGAAACAGTTGCT 11703 Query 30310 CACCGCATTGCCGTTGGGCATATAGCGAGTTTCCGGGTCACCACCGACGTTGCCAACCAG 30369 || ||||||||||| ||||||||||| |||| || ||| ||| | || || || | Sbjct 11704 -ACTGCATTGCCGTTAGGCATATAGCGCATTTCTGGCTCATTACCAATATTACCGACTAA 11762 Query 30370 AATGACTTTGTTAACGCCTCT 30390 || ||||| |||| ||||| Sbjct 11763 TATAACTTTATTAATACCTCT 11783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145595523326848