Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq373 127 1e-24 >seq373 Length=1274844 Score = 127 bits (140), Expect = 1e-24 Identities = 209/296 (71%), Gaps = 4/296 (1%) Strand=Plus/Plus Query 37853 ATTAAAACTAACCCTACATCACGCCGTCTAATTGTCAATGGATGGAATCCA-CATGAAGT 37911 ||||| ||||| ||| || || ||| | |||||| | ||||| || ||| | || Sbjct 929326 ATTAACACTAATCCTGATTCGCGGCGTTTGATTGTCTCAGCTTGGAACCCTGCATTA-GT 929384 Query 37912 AGATAAGGCAGCATTGCCACCTTGTCATACATTGTTCCAGTTCTTTGTAGAGAATGGAAA 37971 |||| | ||| | |||||||| ||| | || ||||| || | ||| | ||||||| Sbjct 929385 AGATGAAATGGCACTACCACCTTGCCATGCCTTATTCCAATTTTATGTGGCAGATGGAAA 929444 Query 37972 ACTAAGCTGTCAGTTATATCAACGTAGTGCTGATTTCTTCTTAGGTGTTCCATTTAATAT 38031 |||| |||||||||||||| ||| |||||| | ||| | |||||||| |||||||| Sbjct 929445 ACTATCATGTCAGTTATATCAGCGTTCAGCTGATATTTTCCTTGGTGTTCCCTTTAATAT 929504 Query 38032 TGCAAGCTATGCGTTGCTTACACATATCGTAGCTGCAGAATGTGGATTAGAAGTTGGTGA 38091 ||| || ||||| || | || || || || || ||| |||| | ||||| Sbjct 929505 TGCTAGTTATGCATTATTGACGATGATGGTGGCGCAAGTTTGTAATTTAGGGTTAGGTGA 929564 Query 38092 ATTTGTCTGGACTGGTGGTG-TAGTTCACCTGTACAGTAATCACCTTGAGCAAGCT 38146 ||| | ||||| ||||||| ||| ||| | || |||||||| || || ||| || Sbjct 929565 TTTTATTTGGACGGGTGGTGATAG-CCACTTATATAGTAATCATCTAGAACAAACT 929619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248734421557336