Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_023588.1
Length=33525
Score E
Sequences producing significant alignments: (Bits) Value
seq21956 143 6e-30
>seq21956
Length=1105
Score = 143 bits (158), Expect = 6e-30
Identities = 288/419 (69%), Gaps = 16/419 (4%)
Strand=Plus/Minus
Query 971 GTAGTGCGCCGTCATCTCGATGCCGGTCCAGTTG--TACCCCTCGGCATCCGCG--GCCA 1026
|||||| |||| || ||||||||| | | | | || ||||| || |||| ||
Sbjct 925 GTAGTGGGCCGACAGCTCGATGCC--TACGGCGGGATAGCCCTC--CAGGCGCGCTGCTT 870
Query 1027 CCAGGGTGGTGCCAGAACCGGCGAACGGGTCGAGGATGCGGCCGCCCTCCTCACAGATGC 1086
||| |||||||| | |||||||| ||||| |||||| ||||||| ||| |||
Sbjct 869 CCACCGTGGTGCCCGCCCCGGCGAAGGGGTCCAGGATGATGCCGCCCGGCTCCACGATCT 810
Query 1087 GCACAAGCTGGCGCATGAGATCGGTCGGCTTGCCAGTGAGGTG---GTGCTTGTCCGCTC 1143
||| | || ||||| | || |||||| | || |||| | ||||| | |
Sbjct 809 TCACGATCTCCCGCATCACCTCCAGCGGCTTCTCGGTCTGGTGTCTGCGCTTGGG-GAGC 751
Query 1144 TACG-CACGGCCTCGCGGAAAACACCCGGCAGCGTGGGTGCCGCCCGGCCCAGCGGCATC 1202
| | || || || ||||| ||||||||||| | || ||| ||| | |||||
Sbjct 750 GAGGGCATGGACTGCCGGAACACACCCGGCAGGATCGGCGCCTTGCGGTCGGCGGGCATG 691
Query 1203 CCGCCCTTGCTGCCCCACACAACGTACTCGGGCTGGTTGGAGAAGCGGCCACGCTGCGGT 1262
||| |||||||||||||| ||| |||| | ||| | | ||| || || ||||| ||
Sbjct 690 TGGCCGTTGCTGCCCCACACCACGAACTCCGCCTGCTGGCGGAACCGCCCGCGCTGGGGG 631
Query 1263 CGCACGCCGCCCGTCTTGTCCCACACCGCCACACCGCGCCAGATGAAGCCGGCGCACTGC 1322
|| || | ||||||||||| || ||| || ||||| || ||||||| || |||
Sbjct 630 CG---GCAGTTGGTCTTGTCCCAGGCCAGCACGCCCCGCCAAATCCAGCCGGCCCATTGC 574
Query 1323 AGCGCGTCGGTAGTCAGCGGCAGCTGCCTCCAGTCGGTGAACAGCAACACGGGCGCGCC 1381
|| |||||||| | || ||||||| ||||||| |||||| | | |||||||||
Sbjct 573 AGGGCGTCGGTCATGCTGGGGAGCTGCCGCCAGTCGATGAACATGCAGATGGGCGCGCC 515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 107126852031248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |