Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq495 95.1 2e-14 seq552 93.3 6e-14 >seq495 Length=1347633 Score = 95.1 bits (104), Expect = 2e-14 Identities = 204/303 (67%), Gaps = 3/303 (1%) Strand=Plus/Minus Query 180553 AGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGA 180612 ||||||| |||| ||| | ||||||||||||||| | || |||||| | || | || Sbjct 721998 AGGTGATCTAGGTCCAGTGTATGGATTTCAATGGCGGCACTTTGGAGCTAAGTACAAAGA 721939 Query 180613 CTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAAACTAT 180672 | || | ||| || || || || || ||||| | || || |||| ||| Sbjct 721938 TATAAAGACAGATTATTCTGGACAGGGCATTGATCAATTGTTGCGCGTGATTGAAATTAT 721879 Query 180673 AAAAAATAATCCCGAATGCCGAAGAATAATCATAGATAGTTGGAATGTATCACAATTACC 180732 || || || || || || | || ||||| | ||||||| | | |||| Sbjct 721878 CAAGAACAAGCCTGATGATCGTCGTATTATCATGAGTGCTTGGAATCCAGTTGATATACC 721819 Query 180733 AGATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGTTAGAAATAAAATTTA 180792 | |||||||| ||||||||||||||| | || || || ||||| || | ||| Sbjct 721818 TAAAATGGCTCTCCCACCATGTCACTGTCTCGTTCAGTTCTATGT-AGCAGGCAAAGAGC 721760 Query 180793 TTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAATAT 180852 ||| |||||| || || ||| | ||||| ||| | |||||||||||||||| ||| | Sbjct 721759 TTTC--TTGCCAGTTATACCAACGTTCTGCTGATATGGGATTAGGTGTACCATTCAATGT 721702 Query 180853 TGC 180855 ||| Sbjct 721701 TGC 721699 >seq552 Length=1229666 Score = 93.3 bits (102), Expect = 6e-14 Identities = 87/109 (80%), Gaps = 4/109 (4%) Strand=Plus/Minus Query 21595 GGGA-ATCATGGTGATAATTGGCCTTTTGATGGACCTGGACAAATTTTAGCTCACGCATT 21653 |||| ||||||| ||| || |||||||||||||| || || || | |||||||| || Sbjct 105135 GGGATATCATGGAGATGGTTATCCTTTTGATGGACCAGGGCAGATACTTGCTCACGCCTT 105076 Query 21654 TTTCCCTGGTTCTGGAAGAGGAGGAGATGTACATTTTGACATTGAAGAA 21702 |||||||||| ||||||||| || |||| |||||||| ||||||| Sbjct 105075 TTTCCCTGGTGGTGGAAGAGGTGGGGATGCCCATTTTGA---TGAAGAA 105030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655076928728000