Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_023614.1
Length=43153
Score E
Sequences producing significant alignments: (Bits) Value
seq14302 114 4e-21
seq2029 111 4e-20
seq6928 80.6 7e-11
>seq14302
Length=8876
Score = 114 bits (126), Expect = 4e-21
Identities = 181/258 (70%), Gaps = 6/258 (2%)
Strand=Plus/Minus
Query 30870 GCGGTTGCTCGGATATTCCGTCCGGGATGTAAATACGATTTAGTTTTAACTTTGGTAGGG 30929
|| |||||||| || | ||| || |||||||| || |||| || ||| | || |||
Sbjct 8830 GCCGTTGCTCGCATTTACCGGCCCGGATGTAAGTATGATTATGTGTTAGTAATAGTTGGG 8771
Query 30930 GATCAGGGTACCGGTAAAAGTACC---CTCGCCAAAAAATTAGGTGGGAAATGGTTTTCC 30986
|| || |||| || ||||||||| || ||| | | ||||| | |||||| |
Sbjct 8770 GACCAAGGTATAGGAAAAAGTACCACACTTGCCCGTA---TGGGTGGTGATTGGTTTAGC 8714
Query 30987 GATACCTTTATGACCGTACACGGTAAAGAGGCGTTGGAACAGATACAAGGGGCCTGGATT 31046
|||| | ||| |||| | |||||||| || || ||| ||||||||| | ||| ||
Sbjct 8713 GATAGCGTTACGACCCTTACGGGTAAAGAAGCCTTAGAAAGCATACAAGGGTCTTGGCTT 8654
Query 31047 ATAGAAATGGCCGAACTTTCAGGACTGCGTAAAGCTGAGGTCGAAGCGGTTAAACATTTC 31106
|| || | | |||||| | || | ||||||||||| || || || ||||| || |||
Sbjct 8653 ATTGAGTTAGGAGAACTTGCCGGGTTACGTAAAGCTGAAGTAGACGCAGTTAAGCACTTC 8594
Query 31107 ATATCTAAACAAGAGGAC 31124
|| |||| |||| |||
Sbjct 8593 GTAAGTAAAAAAGAAGAC 8576
>seq2029
Length=231691
Score = 111 bits (122), Expect = 4e-20
Identities = 181/256 (71%), Gaps = 6/256 (2%)
Strand=Plus/Minus
Query 37533 AGGCAGTCCGTGTCAGGG--TTTCAGTTTTGCAGGGAAACAATTAAATTTCGACGACCCT 37590
||| ||||| |||||||| ||||| |||||||| ||||| | ||| || || |||
Sbjct 195971 AGGAAGTCCATGTCAGGGGTTTTCA--TTTGCAGGTAAACAGCTTGCTTTTGATGATCCT 195914
Query 37591 CGCAGTATGTTATTTTTTGAGTTTGTCAGGATTCTGGACGAGGTTCGAGAAATTAATCCA 37650
|| | | | ||||||| |||||| ||||| || | | || | |||||
Sbjct 195913 CGTTCAAAGCTGTTTTTTGTGTTTGTGGATATTCTCAACCATATACGTTCCTTAAATCCT 195854
Query 37651 GACGTTAAATTCTTACTGGAAAATGTGAGAATGAAAAAAGAGTACCAAAATGTCATTTCT 37710
|| || || || |||||||||||||| | ||||| |||||||||||| | || ||| ||
Sbjct 195853 GATGTGAAGTTTTTACTGGAAAATGTTCGTATGAAGAAAGAGTACCAACAGGTGATTACT 195794
Query 37711 GAGTAC-ATGGGTGTACAACCTATCGAGGTTAATTCCGCGTTGGTTTCAGCCCAAAACAG 37769
|| ||| ||||| ||| || ||| | | ||| ||| | || ||||| ||| | |
Sbjct 195793 GA-TACGATGGGGGTAGAAAGTATGCTGATAAATAGTGCGCTAGTATCAGCACAAGATCG 195735
Query 37770 GAAACGACTATATTGG 37785
|||||| ||||||||
Sbjct 195734 TAAACGATTATATTGG 195719
>seq6928
Length=39225
Score = 80.6 bits (88), Expect = 7e-11
Identities = 95/126 (75%), Gaps = 2/126 (2%)
Strand=Plus/Minus
Query 38302 AAACTGACACCGATTGAGTGCGAACGTCTGCAAACCGTGCCCGACCATTACACGGATTGC 38361
||||||||||||||||| || ||||| |||| || |||| ||| |||||| | ||
Sbjct 25385 AAACTGACACCGATTGAATGTGAACGCTTGCAGACACTGCCGGACGGTTACACTGCCGGC 25326
Query 38362 GTAAGTAATTCACAGCGTTATAAGATGC-TCGGTAATGGTTGGACAGTTGACGTAATCGC 38420
| || ||| ||||||| ||||| |||| | || || || ||||||| || || |||
Sbjct 25325 ATCAGCAATACACAGCGGTATAA-ATGCTTGGGCAACGGCTGGACAGCCGAGGTTATCAT 25267
Query 38421 ACACAT 38426
||||||
Sbjct 25266 ACACAT 25261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137927381530960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |