Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq783 113 4e-20
seq2315 109 5e-19
seq1551 100 3e-16
>seq783
Length=580412
Score = 113 bits (124), Expect = 4e-20
Identities = 146/199 (73%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACC 137273
|| ||||| || || |||||||| || || || | || | ||||| |||||||||||
Sbjct 391321 GTGGATTCCTTCTGAATGTTGTAGTCAGACAGGGTTCGTCCA-TCTTCAAGTTGTTTACC 391263
Query 137274 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTT 137333
|||| |||| ||||| |||||||| ||||| ||||| || || || |||||| |||
Sbjct 391262 AGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCCCTCCTTATCCTGAATTTTGGCTTT 391203
Query 137334 TAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 137393
| | ||| | ||||||| | || ||||| | ||| | || ||||| ||||| ||
Sbjct 391202 CACATTTTCGATTGTGTCTGAAGCCTCAACTTCCAAAGTGATGGTTTTGCCAGTCAAAGT 391143
Query 137394 TTTTACGAATATTTGCATA 137412
|| ||||| || ||||||
Sbjct 391142 CTTGACGAAAATCTGCATA 391124
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGA 137255
||||| || | ||||| ||||||||||||||| |||||||| ||| || || | || |
Sbjct 390115 CGCAACACAAGATGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGACAGGGTTCGTCCA 390056
Query 137256 GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 137315
||||| || || || || ||| |||||| | || || || || || |||||||| ||
Sbjct 390055 -TCTTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTT 389997
Query 137316 GTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCAC 137375
|| ||| || ||| | | ||| | ||||||| || || ||||| | ||| |
Sbjct 389996 ATCCTGAATCTTGGCTTTGACATTTTCGATTGTGTCTGAGGCCTCAACTTCTAGAGTGAT 389937
Query 137376 CGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| ||||| || | || || || || || |||||
Sbjct 389936 GGTTTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 389901
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/206 (70%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 137208 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCG--AGTCTTCGAGT 137265
||| | |||||||||||| || |||||||||| || | | | ||| ||| |||||
Sbjct 390332 ATGGAGTGTAGATTCTTTCTGAATGTTGTAAT--CTGAAAGAGTTCGGCCGTCCTCGAGC 390275
Query 137266 TGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATT 137325
|| || |||||| |||||| | || || || || || |||||||| ||||| ||||
Sbjct 390274 TGCTTGCCAGCAAAGATCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATT 390215
Query 137326 TTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCG 137385
|| ||| | | || | ||| || | | || ||||| | ||| | || || |||
Sbjct 390214 TTGGCTTTGACATTCTCGATCGTATCCGAAGCCTCGACTTCCAAAGTAATAGTTTTCCCG 390155
Query 137386 GTCAATGTTTTTACGAATATTTGCAT 137411
|| | |||||||| || || |||||
Sbjct 390154 GTAAGAGTTTTTACAAAAATCTGCAT 390129
>seq2315
Length=138946
Score = 109 bits (120), Expect = 5e-19
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 137222 CTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGA 137281
||||||||||||||||||| || ||||| || || || || ||||||||| |||
Sbjct 27320 CTTTTTGTATGTTGTAATCAGACAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGA 27261
Query 137282 TCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTT 137341
| || | ||||||||| ||||| || ||||| ||||| || ||| ||||| | ||
Sbjct 27260 TAAGTCTTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGTATCTTTGCTTTTACATTTT 27201
Query 137342 CCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGA 137401
| | || || | ||||| ||||| | || | || || || ||||| || || ||||
Sbjct 27200 CAATTGTATCAGATGGTTCCACTTCCAAGGTGATAGTTTTTCCAGTCAAAGTCTTAACGA 27141
Query 137402 ATATTTGCAT 137411
| ||||||||
Sbjct 27140 AGATTTGCAT 27131
>seq1551
Length=444118
Score = 100 bits (110), Expect = 3e-16
Identities = 112/150 (75%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 137263 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 137322
||||||||||||||| |||| ||||| |||||||| ||||||||||| | || ||
Sbjct 25191 AGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGTATGCCCGCCTTATCCTGG 25250
Query 137323 ATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTG 137382
||||| ||||| | ||| | ||||||| | || ||||| | ||| | || |||
Sbjct 25251 ATTTTGGCTTTTACATTTTCGATTGTGTCTGAAGCCTCAACTTCCAAAGTGATGGTTTTG 25310
Query 137383 CCGGTCAATGTTTTTACGAATATTTGCATA 137412
|| ||||| || || ||||| || ||||||
Sbjct 25311 CCAGTCAAAGTCTTGACGAAAATCTGCATA 25340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488392600214400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |