Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_023848.1
Length=163023
Score E
Sequences producing significant alignments: (Bits) Value
seq39 102 8e-17
seq123 98.7 1e-15
seq1206 91.5 2e-13
>seq39
Length=3240425
Score = 102 bits (112), Expect = 8e-17
Identities = 113/151 (75%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 84285 TTTTCTAAACGCGTCCAATGAAAATAATTTTTTCCTCCTTGATTACATAATTTAGTTGCG 84344
|||||||| ||| |||| | | | ||| || || || |||||||||||| ||
Sbjct 2060303 TTTTCTAATCGCATCCAGTTTCTAAATCGTTTACCGCCACTATGACATAATTTAGTAGCA 2060362
Query 84345 TTAAAATACCCAGTAACCTTATCTATGACCAATTTAAACTCTCCAAAGAGACCATAATAA 84404
|||||| | ||||| ||||||||| ||||| ||||| ||||||||||||||||| ||
Sbjct 2060363 TTAAAACATCCAGTCGACTTATCTATAACCAAATTAAAATCTCCAAAGAGACCATACCAA 2060422
Query 84405 AAGGTGTCTTTAATGTGTTCAAAGCATATAT 84435
| |||||| || |||||| | |||| ||
Sbjct 2060423 TACTGGTCTTTGATTTGTTCATAACATACAT 2060453
>seq123
Length=2135277
Score = 98.7 bits (108), Expect = 1e-15
Identities = 83/102 (81%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 84299 CCAATGAAAATAATTTTTTCCTCCTTGATTACATAATTTAGTTGCGTTAAAATACCCAGT 84358
||||||||| |||| ||||| || | |||||||| ||||| ||||| ||||| |||||
Sbjct 576822 CCAATGAAAGAAATTCTTTCCACCATCTTTACATAACTTAGTGGCGTTGAAATATCCAGT 576881
Query 84359 AACCTTATCTATGACCAATTTAAACTCTCCAAAGAGACCATA 84400
| |||||||| |||| || || |||||||||||||||||
Sbjct 576882 AGATTTATCTATAACCAGCTTGAAATCTCCAAAGAGACCATA 576923
>seq1206
Length=549353
Score = 91.5 bits (100), Expect = 2e-13
Identities = 91/118 (77%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 84318 CCTCCTTGATTACATAATTTAGTTGCGTTAAAATACCCAGTAACCTTATCTATGACCAAT 84377
||||| |||||||||||| || || |||||| | |||||| ||||||||||||||
Sbjct 366503 CCTCCACTATTACATAATTTGGTAGCATTAAAACAACCAGTAGACTTATCTATGACCAGA 366444
Query 84378 TTAAACTCTCCAAAGAGACCATAATAAAAGGTGTCTTTAATGTGTTCAAAGCATATAT 84435
||||| | ||||||||||||||| || | ||||| || |||| | | |||| ||
Sbjct 366443 TTAAATTTTCCAAAGAGACCATACCAATACTGATCTTTGATTTGTTTATAACATAAAT 366386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521383973018560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |