Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_024124.2 Length=169148 Score E Sequences producing significant alignments: (Bits) Value seq1535 84.2 2e-11 seq1094 84.2 2e-11 >seq1535 Length=1988416 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 108422 GGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 108481 |||| || || ||||| || || || || ||||| | |||||||||| | | Sbjct 223545 GGTGCACATCATCTGAATGTGAATGTACTCAACCGTGAGATGTTGGAAGATGCTATGGAA 223604 Query 108482 CATCCGGAAAAATATCCTCAGCTGACCATCCGTGTATCCGGTTATGCAGTT 108532 |||||||||||||||||||| || || || || |||||||||||||||||| Sbjct 223605 CATCCGGAAAAATATCCTCAACTTACGATTCGGGTATCCGGTTATGCAGTT 223655 >seq1094 Length=2708314 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 108428 CAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCG 108487 || |||||||| || || || ||| ||||||| |||||||||| | ||||||| Sbjct 382280 CACCACCTGAATGTAAATGTACTGAACCGTGAAATGTTGGAAGATGCGATGGAGCATCCA 382221 Query 108488 GAAAAATATCCTCAGCTGACCATCCGTGTATCCGGTTATGCAGT 108531 || ||||| ||||||||||| |||||||| || || ||||| || Sbjct 382220 GAGAAATACCCTCAGCTGACTATCCGTGTTTCAGGATATGCTGT 382177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540977898978560