Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_024134.1 Length=139020 Score E Sequences producing significant alignments: (Bits) Value seq2134 87.8 2e-12 >seq2134 Length=118285 Score = 87.8 bits (96), Expect = 2e-12 Identities = 181/266 (68%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 135625 ACGACCAAAAATCTCGTCCATCAAAACTTTTAAATACGCCATTTCGCAATCATCTA-AGT 135683 ||| ||||||||||| |||||||| | ||||| ||| || ||| ||||| | | | Sbjct 8155 ACGCCCAAAAATCTCATCCATCAACATTTTTAGATATGCTTGTTCATTGTCATCAATACT 8096 Query 135684 GAACGAA-TATTACCCCATCATCACTTAGAAGATTACGAATTATTTCTAACCTATCCCTC 135742 | | || || |||| |||||| || |||||| || | ||||| || ||||| | | Sbjct 8095 TATCCAAATACTACC--ATCATCTGCTAAAAGATTTCGTAAAATTTCCAATCTATCACGC 8038 Query 135743 ATTAAGCCCAGCCAAATGGAATGCTCCAGGCTATCATCGTAGTGCTCAAAAGCCCTTCCG 135802 ||||| ||||||||| || || | || ||||| || ||| || || Sbjct 8037 ATTAAAGAAAGCCAAATGCTGTGTTCATATCCGTCGTCGTATTGAGGAAACGCAGAGCCA 7978 Query 135803 GTATTGAATGGTGGGTCGATGTAAACACACTTCACTTTGCCTGTATACTCTTGCTCTAGC 135862 ||||| | || ||||||||||| | ||| ||||||| ||| | | |||| | || || Sbjct 7977 GTATTATACGGCGGGTCGATGTAGATACATTTCACTTGGCCGGCAAACTCGTCTTCGAGG 7918 Query 135863 GCCTTCAATGCTAATAAGTTATCTCC 135888 | || | || | || |||||| || Sbjct 7917 GATTTTAGGGCAAGTAGGTTATCGCC 7892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444598176313600