Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_024214.1 Length=55584 Score E Sequences producing significant alignments: (Bits) Value seq2342 80.6 9e-11 >seq2342 Length=1184292 Score = 80.6 bits (88), Expect = 9e-11 Identities = 88/117 (75%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 8588 AGAAACACTTATTGCTACTGTGAAACCAGATAATGCTACAAATAAAACTGTCAAATGGGT 8647 ||||||||||||||| ||| | | || || ||||||||||||||| | | ||| Sbjct 850306 AGAAACACTTATTGCAACTATTGAGCCTGACAATGCTACAAATAAAGATATTGTGTGGTC 850365 Query 8648 AAGTGGTGATGAAGCTATTGCCACTGTTTCCGATAAAGGTGAAGTAACTGCTGTTGC 8704 ||| ||||||||||||||| ||| || ||| || ||| |||| ||||| |||| Sbjct 850366 GAGTAGTGATGAAGCTATTGTCACAGTAGACGAGAACGGTAAAGTTACTGCAATTGC 850422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 177694870335584