Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_024364.1 Length=131952 Score E Sequences producing significant alignments: (Bits) Value seq2441 107 2e-18 >seq2441 Length=2995558 Score = 107 bits (118), Expect = 2e-18 Identities = 259/388 (67%), Gaps = 8/388 (2%) Strand=Plus/Minus Query 107517 ACTCTATTCATAATTATATTGACATCCCTAATAAGGTTATTCGTAAAGGTGCGACAGATG 107576 |||| || ||||||| |||||| | | | | | ||||||| |||||||| | | || Sbjct 370680 ACTCGATGCATAATTTTATTGATACACGTGACTGGATTATTCGAAAAGGTGCTATACGTG 370621 Query 107577 CCTCTAAAGGAAAACAATTGGTTATCCCACTAAATATGCGTGATGGTAGCATTATTGCCA 107636 | | ||| || || | || ||||||| | |||||||| |||||| | ||| | Sbjct 370620 CTTATAAGGGTGAAAAGATGATTATCCCTTTCAATATGCGCGATGGTTTGTTGATTTGCG 370561 Query 107637 CAGGAAAGGGAAACGAAGACTGGAATAATTCGGCACCTCATGGGGCAGGTAGGGTACTGT 107696 |||||| | || |||||||||| |||||| || ||||||||||| || ||||| Sbjct 370560 AAGGAAAAAGCAATAAAGACTGGAACTGTTCGGCTCCACATGGGGCAGGAAGAATACTGG 370501 Query 107697 CCCGTTCTAAAGC--TAAAGAAACACTAGAAATGGAGGACTTTAAGAATACAATGAAAGA 107754 | ||| | |||| | ||| || || || ||| | || |||| ||| ||| ||| Sbjct 370500 CACGTAATCAAGCATTTAAG--ACCCTTGATATGAATGAATTTAGAAATGAGATGGAAGG 370443 Query 107755 TGTTTGGTCTTCTTCTGTACTAGAATCTACGCTAGATGAGGCACCATTTGCCTATAAAAA 107814 ||| ||| | || ||| |||||||| || ||||| | || | || || ||| | Sbjct 370442 AATTTATTCTACCTCCGTATGCGAATCTACACTGGATGAATCGCCTATGGCATACAAAGA 370383 Query 107815 GAAAGAGAGTATCCTAGAGAATATTACAGATACGGTTG--ACATCGACTTCATTGTCAAA 107872 ||| | || | || ||||| |||||| | || | | | | || || ||| Sbjct 370382 TAAAAATGTGATTATGGAAGCTATTAAAGATACCGCTGTAATTTTGGATACA--GTAAAA 370325 Query 107873 CCAATCTATAATTTTAAAGCGCATTAAT 107900 || || | ||| ||||||| |||||| Sbjct 370324 CCTATATTGAATATTAAAGCCAATTAAT 370297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421994054903256