Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_024364.1
Length=131952
Score E
Sequences producing significant alignments: (Bits) Value
seq2441 107 2e-18
>seq2441
Length=2995558
Score = 107 bits (118), Expect = 2e-18
Identities = 259/388 (67%), Gaps = 8/388 (2%)
Strand=Plus/Minus
Query 107517 ACTCTATTCATAATTATATTGACATCCCTAATAAGGTTATTCGTAAAGGTGCGACAGATG 107576
|||| || ||||||| |||||| | | | | | ||||||| |||||||| | | ||
Sbjct 370680 ACTCGATGCATAATTTTATTGATACACGTGACTGGATTATTCGAAAAGGTGCTATACGTG 370621
Query 107577 CCTCTAAAGGAAAACAATTGGTTATCCCACTAAATATGCGTGATGGTAGCATTATTGCCA 107636
| | ||| || || | || ||||||| | |||||||| |||||| | ||| |
Sbjct 370620 CTTATAAGGGTGAAAAGATGATTATCCCTTTCAATATGCGCGATGGTTTGTTGATTTGCG 370561
Query 107637 CAGGAAAGGGAAACGAAGACTGGAATAATTCGGCACCTCATGGGGCAGGTAGGGTACTGT 107696
|||||| | || |||||||||| |||||| || ||||||||||| || |||||
Sbjct 370560 AAGGAAAAAGCAATAAAGACTGGAACTGTTCGGCTCCACATGGGGCAGGAAGAATACTGG 370501
Query 107697 CCCGTTCTAAAGC--TAAAGAAACACTAGAAATGGAGGACTTTAAGAATACAATGAAAGA 107754
| ||| | |||| | ||| || || || ||| | || |||| ||| ||| |||
Sbjct 370500 CACGTAATCAAGCATTTAAG--ACCCTTGATATGAATGAATTTAGAAATGAGATGGAAGG 370443
Query 107755 TGTTTGGTCTTCTTCTGTACTAGAATCTACGCTAGATGAGGCACCATTTGCCTATAAAAA 107814
||| ||| | || ||| |||||||| || ||||| | || | || || ||| |
Sbjct 370442 AATTTATTCTACCTCCGTATGCGAATCTACACTGGATGAATCGCCTATGGCATACAAAGA 370383
Query 107815 GAAAGAGAGTATCCTAGAGAATATTACAGATACGGTTG--ACATCGACTTCATTGTCAAA 107872
||| | || | || ||||| |||||| | || | | | | || || |||
Sbjct 370382 TAAAAATGTGATTATGGAAGCTATTAAAGATACCGCTGTAATTTTGGATACA--GTAAAA 370325
Query 107873 CCAATCTATAATTTTAAAGCGCATTAAT 107900
|| || | ||| ||||||| ||||||
Sbjct 370324 CCTATATTGAATATTAAAGCCAATTAAT 370297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421994054903256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |