Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 232 1e-55
seq783 176 9e-39
seq242 159 7e-34
seq1551 134 3e-26
seq957 91.5 3e-13
seq779 89.7 1e-12
>seq2315
Length=138946
Score = 232 bits (256), Expect = 1e-55
Identities = 188/228 (82%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||| || ||| ||||| || ||||||||||| |||||||| ||||| ||||| ||
Sbjct 33220 ACCACCTCGCAGACGGAGAACCAAATGCAGAGTAGACTCTTTCTGAATATTGTAATCTGA 33161
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| | | ||| || || || ||||| |||||||| || ||||| || || ||||||||
Sbjct 33160 AAGTGTGCGACCATCCTCGAGCTGTTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGAGG 33101
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||| ||
Sbjct 33100 GATTCCCTCCTTATCTTGAATCTTTGCTTTTACATTCTCAATGGTATCTGAAGGTTCCAC 33041
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||| || || ||||| |||||||| ||||| ||||| ||||||||
Sbjct 33040 TTCCAATGTAATTGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCAT 32993
Score = 174 bits (192), Expect = 3e-38
Identities = 153/191 (80%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680
|||| ||||| || |||||||| || | | || || || || || || ||||||||||
Sbjct 27320 CTTTTTGTATGTTGTAATCAGACAGTGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGA 27261
Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740
| |||||||| ||||| ||||| || |||||||| ||||| |||||||||||||||||||
Sbjct 27260 TAAGTCTTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGTATCTTTGCTTTTACATTTT 27201
Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800
|||| |||||| ||||| |||||||| || || || || || ||||| ||||| || |
Sbjct 27200 CAATTGTATCAGATGGTTCCACTTCCAAGGTGATAGTTTTTCCAGTCAAAGTCTTAACGA 27141
Query 82801 ATATCTGCATT 82811
| || ||||||
Sbjct 27140 AGATTTGCATT 27130
Score = 158 bits (174), Expect = 2e-33
Identities = 149/190 (78%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680
|||| || ||||| || || || || | | ||| ||||| | ||||| || ||||| |
Sbjct 28211 CTTTTTGGATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAA 28152
Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740
||| || || |||||||| || |||||||| || |||||||| ||||| ||||||||||
Sbjct 28151 TTAATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATTTTTGCCTTTACATTTT 28092
Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800
|||| |||||| |||||||| |||| || || || |||||||| | ||||| ||||
Sbjct 28091 CAATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTGCCTGTGAGGGTCTTCACAA 28032
Query 82801 ATATCTGCAT 82810
||||||||||
Sbjct 28031 ATATCTGCAT 28022
Score = 154 bits (170), Expect = 3e-32
Identities = 147/188 (78%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 82623 TTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATT 82682
|| || ||||| || || || || | | ||| ||||| | ||||| || ||||| |||
Sbjct 27707 TTTTGAATATTGTAGTCCGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAATT 27648
Query 82683 AGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCA 82742
| || || |||||||| || |||||||| || |||||||||||||| ||||||||||||
Sbjct 27647 AATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCA 27588
Query 82743 ATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAAT 82802
|| |||||| |||||||| |||| || || || || ||||| | ||||| ||||||
Sbjct 27587 ATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAAT 27528
Query 82803 ATCTGCAT 82810
||||||||
Sbjct 27527 ATCTGCAT 27520
Score = 150 bits (166), Expect = 4e-31
Identities = 146/188 (78%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 82623 TTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATT 82682
|| || ||||| || || || || | | || ||||| | |||||||| ||||| |||
Sbjct 29148 TTTTGAATATTGTAGTCCGACAGTGTGCGGCCATCTTCCAACTGTTTTCCTGCAAAAATT 29089
Query 82683 AGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCA 82742
| || || || ||||| || |||||||| || |||||||||||||| ||||||||||||
Sbjct 29088 AATCGCTGCTGGTCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTTTCA 29029
Query 82743 ATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAAT 82802
|| |||||| |||||||| |||| || || || || ||||| | ||||| ||||||
Sbjct 29028 ATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCACAAAT 28969
Query 82803 ATCTGCAT 82810
||||||||
Sbjct 28968 ATCTGCAT 28961
Score = 122 bits (134), Expect = 2e-22
Identities = 141/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680
|||| || || ||||| || || || | | || ||||| || ||||| || || || |
Sbjct 26967 CTTTTTGAATGTTATAGTCTGAAAGTGTGCGTCCATCTTCCAGCTGTTTCCCTGCGAAAA 26908
Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740
| | ||| || ||||| ||||| || || || || |||||||| |||||||||||||| |
Sbjct 26907 TCAATCTCTGCTGATCAGGAGGAATCCCCTCTTTGTCTTGAATTTTTGCTTTTACATTCT 26848
Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800
|||| |||||| ||||| || || | ||||| || || || || | || || ||||
Sbjct 26847 CAATGGTATCAGATGGTTCCACCTCAAGGGTTATGGTTTTACCAGTAAGAGTTTTCACAA 26788
Query 82801 ATATCTGCAT 82810
| ||||||||
Sbjct 26787 AAATCTGCAT 26778
>seq783
Length=580412
Score = 176 bits (194), Expect = 9e-39
Identities = 166/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || ||||| ||||| ||||| ||||| || || || ||||| || ||| || |||
Sbjct 391336 AGCACCAAGTGGAGAGTGGATTCCTTCTGAATGTTGTAGTCAGACAGGGTTCGTCCATCT 391277
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| |||||||| ||||||||||| || | || ||||||||||| || || ||||||||
Sbjct 391276 TCAAGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGAATGCCCTCCTTATCC 391217
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
||||| || ||||| |||||||| || || || || || ||||||||||| || ||
Sbjct 391216 TGAATTTTGGCTTTCACATTTTCGATTGTGTCTGAAGCCTCAACTTCCAAAGTGATGGTT 391157
Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| ||||| ||||| || || ||||||||
Sbjct 391156 TTGCCAGTCAAAGTCTTGACGAAAATCTGCAT 391125
Score = 165 bits (182), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| || |||||||||||||| || || ||||| || ||| ||| ||||| || || ||
Sbjct 390331 TGGAGTGTAGATTCTTTCTGAATGTTGTAATCTGAAAGAGTTCGGCCGTCCTCGAGCTGC 390272
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| | ||| ||||| ||||| || || |||||||| || ||||| ||
Sbjct 390271 TTGCCAGCAAAGATCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATTTTG 390212
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
||||| ||||| || |||||||| || || ||||||||||| || || || || ||
Sbjct 390211 GCTTTGACATTCTCGATCGTATCCGAAGCCTCGACTTCCAAAGTAATAGTTTTCCCGGTA 390152
Query 82788 AACGTCTTTACAAATATCTGCATT 82811
| || |||||||| |||||||||
Sbjct 390151 AGAGTTTTTACAAAAATCTGCATT 390128
Score = 163 bits (180), Expect = 6e-35
Identities = 150/190 (79%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680
||||||||||||| || || || || |||| |||||||| | |||||| ||||||||||
Sbjct 387247 CTTTCTGTATATTGTAGTCTGACAGCGTTCTTCCGTCTTCCAATTGTTTGCCAGCAAAGA 387188
Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740
||| ||| ||||| |||||||| ||||| || || ||||||||||| || || || || |
Sbjct 387187 TTAATCTCTGTTGGTCTGGAGGAATTCCCTCTTTGTCTTGAATCTTAGCCTTCACGTTCT 387128
Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800
|||| ||||| || ||| ||||| | || || || || ||||||| ||||| || |
Sbjct 387127 CAATGGTATCTGAAGCTTCAACTTCTAGGGTGATAGTTTTCCCTGTCAGGGTCTTCACGA 387068
Query 82801 ATATCTGCAT 82810
| ||||||||
Sbjct 387067 AAATCTGCAT 387058
Score = 147 bits (162), Expect = 4e-30
Identities = 157/205 (77%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| || ||||||||||| || || || || || || || ||| || ||||| || ||
Sbjct 390103 TGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGACAGGGTTCGTCCATCTTCAAGCTGC 390044
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| || |||||||| | ||| ||||| ||||| || || ||||||||||| ||||||||
Sbjct 390043 TTGCCGGCAAAGATCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTATCCTGAATCTTG 389984
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGG-TTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786
||||| |||||||| || || || | ||| || ||||| | ||| || || ||||| ||
Sbjct 389983 GCTTTGACATTTTCGATTGTGTC-TGAGGCCTCAACTTCTAGAGTGATGGTTTTGCCAGT 389925
Query 82787 CAACGTCTTTACAAATATCTGCATT 82811
| ||||| ||||| |||||||||
Sbjct 389924 AAGAGTCTTCACAAAAATCTGCATT 389900
Score = 140 bits (154), Expect = 6e-28
Identities = 145/190 (76%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680
||||||| ||||| || || || ||| | || || || ||||| || || ||||||||||
Sbjct 390546 CTTTCTGAATATTGTAGTCTGACAGAGTCCTTCCATCCTCTAGCTGCTTGCCAGCAAAGA 390487
Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740
| | ||| ||||| ||||| || || |||||||| || |||||||| ||||| || ||||
Sbjct 390486 TCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGCTTTAACGTTTT 390427
Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800
| ||||| || || || ||||||||||| || || || || || | || || || |
Sbjct 390426 CGATCGTGTCTGAAGCCTCGACTTCCAAAGTGATGGTTTTACCAGTAAGGGTTTTCACGA 390367
Query 82801 ATATCTGCAT 82810
| ||||||||
Sbjct 390366 AAATCTGCAT 390357
>seq242
Length=1788442
Score = 159 bits (176), Expect = 7e-34
Identities = 151/193 (78%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680
||||||| |||||||||||||| || ||| || || ||||| || ||||||||||| |
Sbjct 1569966 CTTTCTGAATATTATAATCAGAGAGTGTTCGTCCATCCTCTAGCTGCTTTCCAGCAAAAA 1569907
Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740
| | ||| |||||||| ||||| || |||||||| ||||| || || ||||| |||||||
Sbjct 1569906 TCAATCTCTGTTGATCAGGAGGGATGCCTTCCTTGTCTTGGATTTTGGCTTTCACATTTT 1569847
Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800
|||| |||||| | ||| || || | || || || || || || || || || || |
Sbjct 1569846 CAATAGTATCAGAGGCTTCAACCTCGAGGGTAATTGTTTTACCCGTTAAAGTTTTCACGA 1569787
Query 82801 ATATCTGCATTAT 82813
|||||||||||||
Sbjct 1569786 ATATCTGCATTAT 1569774
>seq1551
Length=444118
Score = 134 bits (148), Expect = 3e-26
Identities = 119/149 (80%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721
|||||||| ||||||||||| || | || |||||||||||||| || ||||||| ||
Sbjct 25191 AGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGTATGCCCGCCTTATCCTGG 25250
Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781
|| || |||||||||||||| || || || || || ||||||||||| || || |||
Sbjct 25251 ATTTTGGCTTTTACATTTTCGATTGTGTCTGAAGCCTCAACTTCCAAAGTGATGGTTTTG 25310
Query 82782 CCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| ||||| ||||| || || ||||||||
Sbjct 25311 CCAGTCAAAGTCTTGACGAAAATCTGCAT 25339
Score = 116 bits (128), Expect = 7e-21
Identities = 138/187 (74%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| || | ||| | || || || ||||||||||| ||||| || || |
Sbjct 25339 TACCACCTCTCAACCGGAAAACCAGATGAAGTGTGGATTCTTTCTGAATATTGTAGTCTG 25398
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | |||| || || || || || || || |||||||| | ||| ||||| |||||||
Sbjct 25399 ACAATGTTCTTCCATCCTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGAG 25458
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||| || | ||| || |||| |||||| || || || |
Sbjct 25459 GAATGCCTTCCTTGCTCTGAATTTTGGATTTAACGTTTTTAATCGTGTCTGAAGCCTCGA 25518
Query 82762 CTTCCAA 82768
|||||||
Sbjct 25519 CTTCCAA 25525
>seq957
Length=827651
Score = 91.5 bits (100), Expect = 3e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 198515 AGGTTGTATGTGGTCTATTTGCGGATTACATGATCGAGCGTGGAAAGAAAGACCTATATT 198574
||||||||||||||| || || || | ||||||| || ||| ||| |||| || ||
Sbjct 417168 AGGTTGTATGTGGTCAATATGTGGCATTCATGATCAAGGTTGGGCAGAGCGACCGATTTT 417227
Query 198575 TGGGAAGATAAGATATATGAATTATGAGGGTTCTAAGAAAAAATTTGATGTTGCTGCATT 198634
||||||||| | || ||||||||||| |||| || | ||||||||| | ||||| |
Sbjct 417228 TGGGAAGATTCGTTACATGAATTATGAAGGTTGCAAAAGGAAATTTGATATAGCTGCCTA 417287
Query 198635 TAT 198637
|||
Sbjct 417288 TAT 417290
>seq779
Length=683570
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766
||||||||||||||||| || || || |||||||| ||||||||| || || |||||
Sbjct 343312 CCTTCCTTATCTTGAATTTTAGCCTTCACATTTTCTATCGTATCAGAAGCCTCGACTTCT 343253
Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || || ||||| ||||| || || || || || ||||||||
Sbjct 343252 AGGGTGATAGTCTTCCCTGTTAATGTTTTCACGAAAATCTGCAT 343209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981515325044488
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