Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq2315 84.2 4e-11 >seq2315 Length=138946 Score = 84.2 bits (92), Expect = 4e-11 Identities = 105/146 (72%), Gaps = 11/146 (8%) Strand=Plus/Minus Query 81637 CAAACACAGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA 81696 |||| ||||||| | || ||||| ||||| ||||| || || || | || || || | Sbjct 33199 CAAATGCAGAGTAGACTCTTTCTGAATATTGTAATCTGAAAGTGTGCGACCATCCTCGAG 33140 Query 81697 C-----------AAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAAT 81745 | ||| || ||||| || || ||||| | ||| | |||||||||||||| Sbjct 33139 CTGTTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGAGGGATTCCCTCCTTATCTTGAAT 33080 Query 81746 CTTTGCTTTTATATTTTCAATCGTAT 81771 ||||||||||| ||| ||||| |||| Sbjct 33079 CTTTGCTTTTACATTCTCAATGGTAT 33054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903131232869120