Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq126 111 4e-19 seq2441 87.8 4e-12 >seq126 Length=3533043 Score = 111 bits (122), Expect = 4e-19 Identities = 155/214 (72%), Gaps = 5/214 (2%) Strand=Plus/Minus Query 58831 CATTATATGAAGCAATACGGAGTATGAAACCATATTAAAAGGGATTCCAAGAAACATATC 58890 ||| || || | ||||| | || || | ||||||||||| | ||||||||| ||||| Sbjct 1887154 CATCATTTGCAACAATAAAGCATACGATGCTATATTAAAAGGAACTCCAAGAAATATATC 1887095 Query 58891 ACCACTACGTTGATAAAATTGTAGATTAAGAGTGTCATCTGCTT-CTACATAAAATTGAC 58949 | ||||||||||||| ||| ||| | ||| | || | || | ||||| ||||| Sbjct 1887094 GGCGCTACGTTGATAAAGTTGCAGAG--ATAGTTT--TCCGTTTGCCACATAGAATTGGA 1887039 Query 58950 ATAAAATATGACAAGGAGGAAGTGCCATTTTATCAATATCACTTACATTCCATGCACTGA 59009 | ||| |||||| ||||| ||| ||| || |||||| || ||||||||||||| Sbjct 1887038 AGAAACAATGACAGGGAGGGAGTTTCATATTGGGAATATCGGCAACGTTCCATGCACTGA 1886979 Query 59010 AAATAATGCGACGAGAATGAGGGTCATTTTTAAT 59043 ||| || || ||||||| || | |||||| || Sbjct 1886978 CAATGATACGCCGAGAATCCGGATTATTTTTTAT 1886945 >seq2441 Length=2995558 Score = 87.8 bits (96), Expect = 4e-12 Identities = 136/193 (70%), Gaps = 5/193 (3%) Strand=Plus/Plus Query 58852 GTATGAAACCATATTAAAAGGGATTCCAAGAAACATATCACCACTACGTTGATAAAATTG 58911 |||||| | ||||| || || | |||||||| ||||| | ||||||||||||| ||| Sbjct 2669948 GTATGATGCAATATTGAACGGTACCCCAAGAAAAATATCTGCGCTACGTTGATAAAGTTG 2670007 Query 58912 TAGA-TTAAGAGTGTCATCTGCTTCTACATAAAATTGACATAAAATATGACAAGGAGGAA 58970 || |||| | | || | |||||||||| ||| | |||||||| || || || | Sbjct 2670008 CAGGCTTAAC----TTACCTTCGGCTACATAAAACTGAAAGAAAATATGGCAGGGGGGGA 2670063 Query 58971 GTGCCATTTTATCAATATCACTTACATTCCATGCACTGAAAATAATGCGACGAGAATGAG 59030 | ||| |||| | ||| |||||||||||| |||| | || || || |||| | Sbjct 2670064 GGTTCATGTTATTCAGATCCGCTACATTCCATGCGCTGACTAACATACGTCGGGAATCCG 2670123 Query 59031 GGTCATTTTTAAT 59043 | | ||| || || Sbjct 2670124 GATTATTCTTTAT 2670136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186435811881112