Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq8899 91.5 4e-14 >seq8899 Length=8765 Score = 91.5 bits (100), Expect = 4e-14 Identities = 105/141 (74%), Gaps = 8/141 (6%) Strand=Plus/Plus Query 18121 GTATGCACCAGCCCCGAGTCCGCATCCACGCCAATGTGCGCTTTCATTCCGAAATGCCAC 18180 |||||||||||||| ||||||| || || || |||||| ||||| ||||| Sbjct 8111 GTATGCACCAGCCCGCTCCCCGCATCTACCCCTGCATGGCATTTCATCCCGAAGCGCCAC 8170 Query 18181 TGGTTACCTTTCTTGGTCTGGTGCATCTCGGGGTC----GCGCTTGCCGCTGCCATTCTT 18236 ||||| || || |||||||||||||| || ||||| || || ||| | ||||| Sbjct 8171 TGGTTTCCCTTTTTGGTCTGGTGCATTTCCGGGTCCCTGGCTTTTTCCG----CGTTCTT 8226 Query 18237 GGTCGAGCTGGGCGCGGCAAT 18257 ||| |||||||||||| |||| Sbjct 8227 GGTGGAGCTGGGCGCGTCAAT 8247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127847150075456