Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq783 113 1e-19 seq2315 111 4e-19 seq779 95.1 3e-14 >seq783 Length=580412 Score = 113 bits (124), Expect = 1e-19 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || || || ||||| || ||||||||||| || ||| || Sbjct 390132 CAGATTTTTGTAAAAACTCTTACCGGGAAAACTATTACTTTGGAAGTCGAGGCTTCGGAT 390191 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || |||| || ||||| ||| ||||| || || ||||| ||| || ||| || Sbjct 390192 ACGATCGAGAATGTCAAAGCCAAA-ATTCAGGACAAGGAAGGCATTCCCCCAGACCAACA 390250 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| | ||||| || || |||||| | || || || | ||| | | ||||||||| | Sbjct 390251 GAGATTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCAGATTACAACAT 390310 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| ||||| || || ||||| |||||||||| Sbjct 390311 TCAGAAAGAATCTACACTCCATCTTGTGCTGAGACTTCG 390349 Score = 107 bits (118), Expect = 5e-18 Identities = 131/176 (74%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCG-AATC 206243 ||||| || || || ||||| |||||||||||||| || ||| ||||| ||| || | Sbjct 390372 AAAACCCTTACTGGTAAAACCATCACTTTGGAAGTCGAGGCTTCAGACACGATCGAAAAC 390431 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 |||||| |||||||| || || ||||| ||| || ||| || ||| | ||||| Sbjct 390432 GTTAAAGC-CAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAACAGAGATTGATCTT 390490 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAG 206359 || || |||||| | || |||||||||||| || | || ||||| | ||||||| Sbjct 390491 TGCTGGCAAGCAGCTAGAGGATGGAAGGACTCTGTCAGACTACAATATTCAGAAAG 390546 Score = 95.1 bits (104), Expect = 3e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || ||||| |||||||||||||| || ||| ||| Sbjct 391128 CAGATTTTCGTCAAGACTTTGACTGGCAAAACCATCACTTTGGAAGTTGAGGCTTCAGAC 391187 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| ||||| || ||||| ||| ||||| || || || || ||| || || || Sbjct 391188 ACAATCGAAAATGTGAAAGCCAAA-ATTCAGGATAAGGAGGGCATTCCTCCAGATCAGCA 391246 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | |||||||| || || || || | ||||||||| | || || | || |||||| | Sbjct 391247 GCGTCTTATCTTTGCTGGTAAACAACTTGAAGATGGACGAACCCTGTCTGACTACAACAT 391306 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 ||||| || || ||||| ||| | || | ||||| Sbjct 391307 TCAGAAGGAATCCACTCTCCACTTGGTGCTTAGACT 391342 Score = 86.0 bits (94), Expect = 1e-11 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || ||||| ||||| ||||| | ||||| ||| ||| || || | || Sbjct 387073 AAGACCCTGACAGGGAAAACTATCACCCTAGAAGTTGAAGCTTCAGATACCATTGAGAAC 387132 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||||| ||||| |||||| || ||| || ||| | ||||| Sbjct 387133 GTGAAGGCTAAGATTCAAGACAAAGAGGGAATTCCTCCAGACCAACAGAGATTAATCTTT 387192 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAG 206359 || || || || |||||||| ||||| || || | || ||||| | ||||||| Sbjct 387193 GCTGGCAAACAATTGGAAGACGGAAGAACGCTGTCAGACTACAATATACAGAAAG 387247 >seq2315 Length=138946 Score = 111 bits (122), Expect = 4e-19 Identities = 124/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || |||||||| ||||| |||||||||||| ||||| ||| | ||| ||||| | Sbjct 27155 ACTGGAAAAACTATCACCTTGGAAGTGGAACCATCTGATACAATTGAAAATGTAAAAGCA 27214 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| ||| || || |||||||||||||| || || ||| Sbjct 27215 AAGATACAAGACAAGGAAGGTATTCCTCCTGATCAGCAAAGACTTATCTTTGCTGGTAAG 27274 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAG 206359 ||| |||| ||||| | || || | ||||||||| | || |||| Sbjct 27275 CAGCTGGAGGATGGCCGCACACTGTCTGATTACAACATACAAAAAG 27320 Score = 105 bits (116), Expect = 2e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || |||||||||||||| ||||| |||| || ||| ||||| Sbjct 28964 CAGATATTTGTGAAGACCCTCACAGGAAAAACCATCACACTGGAGGTAGAACCATCTGAT 29023 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| |||||| |||||||||||| ||||||||||| || ||| || Sbjct 29024 ACCATTGAAAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCACCAGACCAGCAG 29083 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAA 206348 || | || || || ||||| |||||||||||||| | || || | || ||||| Sbjct 29084 CGATTAATTTTTGCAGGAAAACAGTTGGAAGATGGCCGCACACTGTCGGACTACAA 29139 Score = 96.9 bits (106), Expect = 8e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || |||||||||||||| ||||| |||| || ||| ||||| Sbjct 27523 CAGATATTTGTGAAGACCCTCACAGGAAAAACCATCACACTGGAGGTAGAACCATCTGAT 27582 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| |||||| |||||||||||| ||||||||||| || || || Sbjct 27583 ACCATTGAAAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCACCAGATCAGCAG 27642 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAA 206348 || | || || || || || |||||||||||||| | || || | || ||||| Sbjct 27643 CGATTAATTTTTGCAGGCAAACAGTTGGAAGATGGTCGCACACTGTCGGACTACAA 27698 Score = 95.1 bits (104), Expect = 3e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || |||||||| ||||| ||||| |||| || ||| ||||| Sbjct 28025 CAGATATTTGTGAAGACCCTCACAGGCAAAACCATCACACTGGAGGTAGAACCATCTGAT 28084 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| |||||| ||| |||||||| ||||||||||| || || || Sbjct 28085 ACCATTGAAAATGTAAAGGCAAAAATTCAAGACAAAGAAGGAATCCCACCAGATCAGCAG 28144 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || || || || || |||||||||||||| | || || | || ||||| || Sbjct 28145 CGATTAATTTTTGCAGGCAAACAGTTGGAAGATGGTCGCACACTGTCGGACTACAATATC 28204 Query 206353 CAGAAAG 206359 || |||| Sbjct 28205 CAAAAAG 28211 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | |||||||| || || || |||||||||||| ||| || Sbjct 32996 CAGATCTTTGTGAAGACCTTGACAGGAAAGACAATTACATTGGAAGTGGAACCTTCAGAT 33055 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || ||||| |||||||||||| || || ||||| || ||| || Sbjct 33056 ACCATTGAGAATGTAAAAGCAAAGATTCAAGATAAGGAGGGAATCCCTCCAGACCAGCAG 33115 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||| || || || || || ||| | || ||||| | || | | |||||||| | Sbjct 33116 AGACTCATTTTTGCTGGCAAACAGCTCGAGGATGGTCGCACACTTTCAGATTACAATATT 33175 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 ||||||||||||||||| || Sbjct 33176 CAGAAAGAGTCTACTCTGCA 33195 >seq779 Length=683570 Score = 95.1 bits (104), Expect = 3e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 || || |||||||| ||||||||||||| ||| ||||| | |||||| | |||||||| Sbjct 346007 ACCAGATGAAGAGTCGACTCTTTCTGGATATTGTAGTCTGACAAAGTGCGGCCATCTTCA 345948 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| ||||| ||||| || ||||| || Sbjct 345947 AGCTGCTTGCCGGCAAAGATCAGACGTTGCTG 345916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181445397577432