Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq1991 140 3e-28 seq2282 98.7 1e-15 seq126 93.3 4e-14 seq2298 84.2 2e-11 seq1191 84.2 2e-11 >seq1991 Length=147557 Score = 140 bits (154), Expect = 3e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 142243 TTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAG 142302 ||||| || |||||||| || | || | | || ||||| | || |||| || || Sbjct 6582 TTCGGGCACCAGATGCGCTTTGACCTCAATGAGGGTTTTCCCGTACTGACCACAAAAAAA 6523 Query 142303 CTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATC 142362 |||||||| |||||||| ||||| |||||||| ||||| || ||||| || || Sbjct 6522 CTGCATCTACGCTCGATCATACATGAACTTCTGTGGTTTCTCAAGGGAGATACCAATATA 6463 Query 142363 AAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCAAC 142422 || |||||||||||| | ||||| | ||| ||||| || ||||| |||||| | |||||| Sbjct 6462 AAATATCTTCACGATAATAACGTTACGATATGGGACGAGTGGGCGGATGCCGACGGCAAC 6403 Query 142423 CTCGGACCTGTCTACGGCAAGCAGTGG 142449 || || || |||||||| | |||||| Sbjct 6402 CTGGGCCCGGTCTACGGATACCAGTGG 6376 >seq2282 Length=143344 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 142243 TTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAG 142302 || ||||| |||||||| || || | || |||| || ||| | | | || || || Sbjct 11867 TTTGGTCAGCAGATGCGCTTTGATTTATCTAAAGGTTTCCCTTTAATGACAACTAAAAAA 11808 Query 142303 CTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATC 142362 |||||||||| || || ||||| | ||||| | ||||||||||| || || Sbjct 11807 ATGCATCTGAAAAGTATTATTCATGAACTTTTATGGTTTATAAAAGGCGATACAAATATT 11748 Query 142363 AAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCAAC 142422 ||||| ||||| ||| | || | |||||| ||||||||||||||| ||||| || Sbjct 11747 AAGTACCTTCAAGATAATGGCGGTAGAATCTGGAATGAATGGGCTGATGAAAATGGTAAT 11688 Query 142423 CTCGGACCTGTCTACGGCAAGCAGTGG 142449 | || ||||| |||||| |||||| Sbjct 11687 TTAGGTCCTGTTTACGGCTCTCAGTGG 11661 >seq126 Length=3533043 Score = 93.3 bits (102), Expect = 4e-14 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 142243 TTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAG 142302 || |||||||||||||| || ||| |||| | |||||||| |||| | || || || Sbjct 1886678 TTTGGTCATCAGATGCGATTTAATATGGCGGATGGCTTTCCGGTTCTTACTACAAAAAAA 1886737 Query 142303 CTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATC 142362 |||| || || || ||||| ||| | || |||||| | | || |||| || || Sbjct 1886738 TTGCACCTAAAATCTATCATTTATGAATTGCTTTGGTTCTTGCAGGGAAATACTAATATA 1886797 Query 142363 AAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATG 142411 || || || |||||||| ||| ||||||| |||||||||| |||| Sbjct 1886798 AAATACCTCACCGATCACAGTGTCCGGATCTGGAATGAATGGGCCGATG 1886846 >seq2298 Length=83281 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 142243 TTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAG 142302 ||||| |||| |||||||| ||| ||| | || || ||| || | | || ||||| Sbjct 73419 TTCGGATATCAAATGCGTTTTAATTTGGAAGAGGGTTTCCCTGTTTTAACGACAAAGAAA 73360 Query 142303 CTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATC 142362 ||||||||||| ||||| || || | || ||||| | || || ||||| || || Sbjct 73359 CTGCATCTGAAATCGATTATTTATGAGTTGCTATGGTTTTTAAAGGGTGATACCAATATT 73300 Query 142363 AAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGC 142406 || ||||| | |||||| ||| | || ||||| |||||||| Sbjct 73299 AAATATCTAAAAGATCACGGCGTTAGTATTTGGGACGAATGGGC 73256 >seq1191 Length=1801643 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 142241 TCTTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGA 142300 ||||||| ||||| | |||| | | ||| | |||||||||| | || | || |||| Sbjct 1359061 TCTTCGGACATCAAAGCCGTTACGACCTGTCGGAAGGCTTTCCGGTGCTGACTACCAAGA 1359002 Query 142301 AGCTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACA 142360 ||||||| || ||||| || || |||| | || ||||| || ||||||||| || Sbjct 1359001 AGCTGCACCTTAAGTCCATTATATACGAATTGCTATGGTTTCTGGCAGGCGATACCAATG 1358942 Query 142361 TCAAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCA 142420 | || ||| | || || || || || ||| | ||||||||||| | |||||| Sbjct 1358941 TAAAATATTTGCAGGAACATGGAGTGCGTATATGGAACGAATGGGCTGACGAGAATGGCG 1358882 Query 142421 ACCTCGGACCTGTCTACGG 142439 | || || | | | ||||| Sbjct 1358881 AACTAGGCCATATATACGG 1358863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500344095297920