Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_025434.1 Length=62699 Score E Sequences producing significant alignments: (Bits) Value seq95 152 2e-32 >seq95 Length=1800565 Score = 152 bits (168), Expect = 2e-32 Identities = 162/203 (80%), Gaps = 12/203 (6%) Strand=Plus/Minus Query 16838 GTGCTCAAAACACCTTAGCAAGTAGCGGTTACCGCGCCCGACAGACATGCGGtttttttt 16897 ||||||||||||| | | | ||||||| ||||| ||||| || ||||||| |||||| Sbjct 66510 GTGCTCAAAACACTT---CTAATAGCGGTAACCGC-CCCGAAAGT-ATGCGGTATTTTTT 66456 Query 16898 GTGTCCAGTCTTCTTGGTTTATGACCGGGCGTGCGGCTAATACAATACC-AGCAAT-GGG 16955 ||| || | || | |||| |||| ||| ||||||||||||||| |||||| ||| Sbjct 66455 -TGTT--GT-TAATTTTTATATGTTCGGGTGTGAGGCTAATACAATACCTAGCAATAGGG 66400 Query 16956 AATATGCCCGCCGACTACTTGCGGTTTTGAGCGCCCGGTCACCCTCTC-AAAAGGGGTAA 17014 ||||||||||||| ||| | |||||||||||| |||| ||||||||| ||||||| ||| Sbjct 66399 AATATGCCCGCCGTCTATTAGCGGTTTTGAGCACCCGTCCACCCTCTCAAAAAGGGTTAA 66340 Query 17015 ATCAAAATATCAAGTAGGACACA 17037 |||||||| | | ||||| ||| Sbjct 66339 TTCAAAATAGCTAATAGGAAACA 66317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200451414797920