Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_025440.1 Length=134369 Score E Sequences producing significant alignments: (Bits) Value seq2441 98.7 9e-16 >seq2441 Length=2995558 Score = 98.7 bits (108), Expect = 9e-16 Identities = 257/388 (66%), Gaps = 8/388 (2%) Strand=Plus/Minus Query 10516 ACTCTATTCATAATTATATTGACATTCCTAATAAGGTTATTCGTAAAGGTGCGACAGATG 10575 |||| || ||||||| |||||| | | | | | ||||||| |||||||| | | || Sbjct 370680 ACTCGATGCATAATTTTATTGATACACGTGACTGGATTATTCGAAAAGGTGCTATACGTG 370621 Query 10576 CCTCTAAAGGAAAACAACTAGTTATCCCACTAAATATGCGTGATGGTAGCATCATTGCCA 10635 | | ||| || || | | ||||||| | |||||||| |||||| | ||| | Sbjct 370620 CTTATAAGGGTGAAAAGATGATTATCCCTTTCAATATGCGCGATGGTTTGTTGATTTGCG 370561 Query 10636 CAGGAAAGGGAAACGAAGACTGGAACAATTCAGCACCTCACGGGGCAGGTAGGGTACTGT 10695 |||||| | || ||||||||||| ||| || || || |||||||| || ||||| Sbjct 370560 AAGGAAAAAGCAATAAAGACTGGAACTGTTCGGCTCCACATGGGGCAGGAAGAATACTGG 370501 Query 10696 CTCGTTCTAAAGC--TAAAGAAACACTAGAAATGGAAGATTTTAAGAATACAATGAAAGA 10753 | ||| | |||| | ||| || || || ||| | || |||| ||| ||| ||| Sbjct 370500 CACGTAATCAAGCATTTAAG--ACCCTTGATATGAATGAATTTAGAAATGAGATGGAAGG 370443 Query 10754 TGTTTGGTCTTCCTCTGTGTTGGAGTCTACACTAGACGAGGCACCGTTTGCCTATAAAAA 10813 ||| ||| |||| || | || |||||||| || || | || | || || ||| | Sbjct 370442 AATTTATTCTACCTCCGTATGCGAATCTACACTGGATGAATCGCCTATGGCATACAAAGA 370383 Query 10814 GAAAGAGAGTATCCTAGAGAACATTACAGATACGGTTG--ATATTGACTTCATTGTCAAA 10871 ||| | || | || |||| |||||| | || || ||| | || || ||| Sbjct 370382 TAAAAATGTGATTATGGAAGCTATTAAAGATACCGCTGTAATTTTGGATACA--GTAAAA 370325 Query 10872 CCAATCTATAATTTTAAGGCACATTAAT 10899 || || | ||| |||| || |||||| Sbjct 370324 CCTATATTGAATATTAAAGCCAATTAAT 370297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429726117934960