Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_025453.1
Length=40286
Score E
Sequences producing significant alignments: (Bits) Value
seq1690 104 6e-18
seq1191 98.7 3e-16
seq1615 82.4 2e-11
>seq1690
Length=1574822
Score = 104 bits (114), Expect = 6e-18
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 37009 GGACCATTAGCTCAGTTGGTTAGAGCAAACGGCTCATAACCGTTCGGTCACAGGTTCGAG 37068
|||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||
Sbjct 661389 GGACCATTAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTCGGTCCTTGGTTCGAG 661330
Query 37069 TCCTGTATGGTCCAC 37083
|||| |||||||||
Sbjct 661329 TCCTAGATGGTCCAC 661315
>seq1191
Length=1801643
Score = 98.7 bits (108), Expect = 3e-16
Identities = 255/374 (68%), Gaps = 30/374 (8%)
Strand=Plus/Minus
Query 10429 GAAAAGAA--TACTTGATGCCTGTTGTGGTAGCAGAATGTTTTGGTTTGATAAGCAAAAC 10486
|||||||| ||||||||||||||||||| | ||||||||||||| ||||||||||||
Sbjct 1470255 GAAAAGAAAATACTTGATGCCTGTTGTGGCTCCCGAATGTTTTGGTTCGATAAGCAAAAC 1470196
Query 10487 --GAACAAGTTTTGTTTATGGACAACAGAG----AACA-TTACGAAAAATTAGACAGCGG 10539
||| | || | | || || || ||| |||| ||||| || ||||| |
Sbjct 1470195 CCGAATACATTAT--TCATAGATAATAGAAGCGAAACACTTACGGCCAAG--GACAGAGA 1470140
Query 10540 GCATGTTA------TCGATGTTAATCCTAATCTAG-TTGCAGATTTTAGAAATATGCCTT 10592
| | | | || ||| || | | || |||| ||||| | |||| |||| |
Sbjct 1470139 TAAAATAAGGACAATAGAAGTTTTACCCGA-CAAGATTGCCGATTTCACAAATTTGCCAT 1470081
Query 10593 TTG--AGGATAATTCGTTTTATCATGTAGTATTTGATCCTCCACATTTATTGAGAGCTGG 10650
||| || || | || ||| || || || || |||||||||||| | | |||
Sbjct 1470080 TTGCTAGTGAAAGT--TTCTATATGGTTGTTTTCGACCCTCCACATTTAAAGCAACTTGG 1470023
Query 10651 TAGTAACAGC-TGGCTGTCCAAAAAATATGGAAAGCTGAATGAGCAAACTTGGAAAGAAG 10709
|| |||| | ||||| | ||||||||||| |||||| ||| |||| || | ||||
Sbjct 1470022 -AGAAACATCATGGCTCGCAAAAAAATATGGCAAGCTGCCTGAC--AACT-GGCAGGAAG 1469967
Query 10710 ATATTCAAAAAGGTTTTTCGGAATGTATGAGAGTCTTAAAACCTAACGGGACATTAGTTT 10769
|| |||||| ||| ||||||||| | || ||||| || || || | | |||
Sbjct 1469966 TAATAAGAAAAGGATTTGATGAATGTATGCGTGTATTAAAGCCAAATGGAGCTCTTATTT 1469907
Query 10770 TCAAATGGAATGAA 10783
|||||||||| |||
Sbjct 1469906 TCAAATGGAACGAA 1469893
>seq1615
Length=177996
Score = 82.4 bits (90), Expect = 2e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 37009 GGACCATTAGCTCAGTTGGTTAGAGCAAACGGCTCATAACCGTTCGGTCACAGGTTCGAG 37068
|| || |||||||||||||||||||||| ||||||||||||| |||||| ||||||||
Sbjct 4924 GGGCCTTTAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTCGGTCCTGGGTTCGAG 4865
Query 37069 TCC 37071
|||
Sbjct 4864 TCC 4862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 128755682520192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |