Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_025460.1 Length=42600 Score E Sequences producing significant alignments: (Bits) Value seq6928 127 6e-25 >seq6928 Length=39225 Score = 127 bits (140), Expect = 6e-25 Identities = 268/396 (68%), Gaps = 4/396 (1%) Strand=Plus/Minus Query 26686 TTACGCGTGCAATGGGTGATGCAGGTATTGAAGCTGATGAGTATCAAAGTGTACTTGATA 26745 |||| ||||| ||||| ||||| | ||| | || |||| ||| | ||| | |||| Sbjct 11146 TTACCCGTGCTATGGGGGATGCTGAGATTAATGCCAATGAATATGGTACTGTCTTGGATA 11087 Query 26746 TGGTAGCGAAAGCAGCACAGGCTAGCGGTATAAGTGTTGATACATTAGCTGATAGCATTA 26805 || | | ||| || || ||||| | ||||| ||||| | | | | Sbjct 11086 TGCTGACCGTAGCGGCGCAAAAGAGCGGGGTTTCAATTGATTCATTAACCGGAAATCTGG 11027 Query 26806 CTAAATACGGTGCTCCAATGAGGGCTATGGGCTTTGAGATGAAAGAATCAATCGCTTTAT 26865 | ||||| || || || ||| | || | || |||| | | || ||||| || | | Sbjct 11026 CGAAATATGGCGCGCCTATGCGTGCGCTTGGGCTTGATACGCAAACTTCAATTGCGATGT 10967 Query 26866 TCTCTCAATGGGAGAAATCAGGTGTTAATACTGAAATAGCCTTCAATGGTTTGAAAAAAG 26925 | | |||||| ||| | |||||||||||||| || || |||| || ||||||| | Sbjct 10966 TTGCCGGATGGGAAAAAGCGGGTGTTAATACTGAGATTGCATTCAGCGGGATGAAAAAGG 10907 Query 26926 CTATATCCAATTGGGGTAAAGCGGGTAAAGACCCAAGAGAAGAATTTAAGAAGACATTAG 26985 | || ||||| ||||| || || |||||| | || | |||||| || ||| | | Sbjct 10906 CAATTTCCAACTGGGGAGCCGCTGGAAAAGACGCGAGTGTAGAATTCGGAAAAACAAT-G 10848 Query 26986 CAGAAATTGAAAGGA--CACCGGATATAGCTAGCGCAACAAGTTTAGCGATTGAAGCATT 27043 ||| | | || ||| | |||||||| || | || || ||| | |||||||||||||| Sbjct 10847 CAGCAGATCAA-GGATGCGCCGGATATTGCAACAGCGACCAGTATGGCGATTGAAGCATT 10789 Query 27044 TGGTGCAAAAGCAGGTCCTGATTTAGCAGATGCTAT 27079 ||| || ||||| || || |||||||| || ||||| Sbjct 10788 TGGAGCGAAAGCCGGCCCCGATTTAGCGGACGCTAT 10753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136158302510048