Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_025470.1 Length=139004 Score E Sequences producing significant alignments: (Bits) Value seq4222 86.0 6e-12 seq1535 86.0 6e-12 seq1702 82.4 7e-11 seq126 82.4 7e-11 >seq4222 Length=21366 Score = 86.0 bits (94), Expect = 6e-12 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 42947 TAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGAAAGTTCGAATC 43001 |||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 17755 TAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCACAGGTTCGAATC 17809 >seq1535 Length=1988416 Score = 86.0 bits (94), Expect = 6e-12 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 42947 TAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGAAAGTTCGAATC 43001 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 336503 TAGCTCAGCTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGAGCGTTCGAATC 336557 >seq1702 Length=707479 Score = 82.4 bits (90), Expect = 7e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 42944 CGTTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGAAAGTTCGAATC 43001 || |||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 285450 CGGTAGCTCAGCTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGTGGGTTCGAATC 285393 >seq126 Length=3533043 Score = 82.4 bits (90), Expect = 7e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 42944 CGTTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGAAAGTTCGAATC 43001 || |||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 646249 CGGTAGCTCAGCTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGTGGGTTCGAATC 646306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444546992180480