Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq783 125 7e-24 seq211 98.7 9e-16 seq2315 91.5 1e-13 seq1551 91.5 1e-13 >seq783 Length=580412 Score = 125 bits (138), Expect = 7e-24 Identities = 144/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || |||||||||||||| || ||| || |||||| || |||||||| | | Sbjct 391318 GATTCCTTCTGAATGTTGTAGTCAGACAGGGTTCGTCCATCTTCAAGTTGTTTACCAGCA 391259 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||||||||| ||||| || ||||| |||||| ||||| Sbjct 391258 AAGATAAGACGCTGCTGATCTGGAGGAATGCCCTCCTTATCCTGAATTTTGGCTTTCACA 391199 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | || || | | ||| ||||| | || | ||||| ||||||| ||| || Sbjct 391198 TTTTCGATTGTGTCTGAAGCCTCAACTTCCAAAGTGATGGTTTTGCCAGTCAAAGTCTTG 391139 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 391138 ACGAAAATCTGCAT 391125 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| || | ||| | | || ||||||||||||||||||||| || ||| || | Sbjct 390115 CGCAACACAAGATGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGACAGGGTTCGTCCA 390056 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||| || |||| | |||| | | |||||| ||||| || |||||||| ||| Sbjct 390055 TCTTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTA 389996 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || ||| | | ||| | || || | | ||| ||||| | || | Sbjct 389995 TCCTGAATCTTGGCTTTGACATTTTCGATTGTGTCTGAGGCCTCAACTTCTAGAGTGATG 389936 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||| ||||| || | ||||||||||| Sbjct 389935 GTTTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 389901 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| ||||||||||| || | || || || |||||||| || || | | Sbjct 390322 GATTCTTTCTGAATGTTGTAATCTGAAAGAGTTCGGCCGTCCTCGAGCTGCTTGCCAGCA 390263 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | | |||||| ||||| || |||||||| || || |||||| ||| | Sbjct 390262 AAGATCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATTTTGGCTTTGACA 390203 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | | ||| ||||| | || | ||||| || || ||||||||| Sbjct 390202 TTCTCGATCGTATCCGAAGCCTCGACTTCCAAAGTAATAGTTTTCCCGGTAAGAGTTTTT 390143 Query 132110 ATGAAAATCTGCAT 132123 | ||||||||||| Sbjct 390142 ACAAAAATCTGCAT 390129 Score = 82.4 bits (90), Expect = 7e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 131934 CTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGA 131993 |||| ||||| |||||||| || || | ||| || ||||| || || | | ||| Sbjct 390546 CTTTCTGAATATTGTAGTCTGACAGAGTCCTTCCATCCTCTAGCTGCTTGCCAGCAAAGA 390487 Query 131994 TTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTT 132053 | | | |||||| ||||| || |||||||| || || ||| || ||| | | || Sbjct 390486 TCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGCTTTAACGTTTT 390427 Query 132054 CCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGA 132113 | | || || | | ||| ||||| | || | ||||||||||| || ||||| | || Sbjct 390426 CGATCGTGTCTGAAGCCTCGACTTCCAAAGTGATGGTTTTACCAGTAAGGGTTTTCACGA 390367 Query 132114 AAATCTGCAT 132123 |||||||||| Sbjct 390366 AAATCTGCAT 390357 >seq211 Length=1809889 Score = 98.7 bits (108), Expect = 9e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 147166 GCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTT 147225 |||||||||||||||||||| || ||||||||||| || ||||| || || |||||| Sbjct 919209 GCCAATTCACAGCTTGCCTCAAGAGCTCCATAGTAGATAGTTTCAAATATCTGCTTGTTT 919150 Query 147226 AGGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAA 147285 || | ||||| || || || |||| | | || || | || ||||| ||||| Sbjct 919149 AGCAACTGAGCTTCCTCACTATCAAAAGGAAACCTCATCAGTATGAATGCATCTGCCAAG 919090 Query 147286 CCCTGGATACCGACGCCGATAGGTCGATG 147314 |||||||| || | ||| |||||||| || Sbjct 919089 CCCTGGATTCCAATGCCAATAGGTCGGTG 919061 >seq2315 Length=138946 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 131934 CTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGA 131993 ||||||||||||| ||||| | || || |||||| |||||||| || | | | Sbjct 26967 CTTTTTGAATGTTATAGTCTGAAAGTGTGCGTCCATCTTCCAGCTGTTTCCCTGCGAAAA 26908 Query 131994 TTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTT 132053 | | | ||| ||||| ||||| || || ||||| || ||||||| ||| | | | Sbjct 26907 TCAATCTCTGCTGATCAGGAGGAATCCCCTCTTTGTCTTGAATTTTTGCTTTTACATTCT 26848 Query 132054 CCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGA 132113 | | ||||| | || ||||| || | || | ||||||||||| |||||||| | | Sbjct 26847 CAATGGTATCAGATGGTTCCACCTCAAGGGTTATGGTTTTACCAGTAAGAGTTTTCACAA 26788 Query 132114 AAATCTGCAT 132123 |||||||||| Sbjct 26787 AAATCTGCAT 26778 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/224 (69%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| || | ||||||||| | | |||||||| ||||| ||||| || | | || Sbjct 33213 CGCAGACGGAGAACCAAATGCAGAGTAGACTCTTTCTGAATATTGTAATC--TGAAAGTG 33156 Query 131963 CGCGA--ATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGC 132020 |||| ||| ||||||||||| || | | | || || | ||| || |||||||| || | Sbjct 33155 TGCGACCATCCTCGAGCTGTTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGAGGGATTC 33096 Query 132021 CTTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGA 132080 | || ||||| ||| ||| ||| | | || | ||||| | || |||||||| | Sbjct 33095 CCTCCTTATCTTGAATCTTTGCTTTTACATTCTCAATGGTATCTGAAGGTTCCACTTCCA 33036 Query 132081 CCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || | || || || |||| || || | || ||||||||| Sbjct 33035 ATGTAATTGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCATG 32992 >seq1551 Length=444118 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 131966 GAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCT 132025 |||| || || |||||||| | | |||| |||||||| ||||||||||||||||| | Sbjct 25182 GAATATTAAAGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGTATGCCCGCC 25241 Query 132026 TTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTC 132085 ||||| ||||| ||| | | ||| | || || | | ||| ||||| | || Sbjct 25242 TTATCCTGGATTTTGGCTTTTACATTTTCGATTGTGTCTGAAGCCTCAACTTCCAAAGTG 25301 Query 132086 AGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | ||||| ||||||| ||| || | |||||||||||| Sbjct 25302 ATGGTTTTGCCAGTCAAAGTCTTGACGAAAATCTGCAT 25339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476463498189120