Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_026016.1
Length=43748
Score E
Sequences producing significant alignments: (Bits) Value
seq6928 132 1e-26
>seq6928
Length=39225
Score = 132 bits (146), Expect = 1e-26
Identities = 269/396 (68%), Gaps = 4/396 (1%)
Strand=Plus/Plus
Query 15948 ATAGCATCTGCTAAATCAGGACCTGCTTTTGCACCAAATGCTTCAATCGCTAAACTTGTT 16007
||||| || |||||||| || || ||||| || ||||||||||||||||| | ||| ||
Sbjct 10753 ATAGCGTCCGCTAAATCGGGGCCGGCTTTCGCTCCAAATGCTTCAATCGCCATACTGGTC 10812
Query 16008 GCGCTAGCTATATCCGGTG--TCCTTTCAATTTCTGCTAATGTCTTCTTAAATTCTTCTC 16065
|| | || |||||||| | ||||| | | |||| | ||| || |||||| | |
Sbjct 10813 GCTGTTGCAATATCCGGCGCATCCTTG-ATCTGCTGC-ATTGTTTTTCCGAATTCTACAC 10870
Query 16066 TTGGGTCTTTACCCGCTTTACCCCAATTGGATATAGCTTTTTTCAAACCACTGAAGGCTA 16125
| | |||||| || || ||||| ||||| || || ||||||| || ||||| || |
Sbjct 10871 TCGCGTCTTTTCCAGCGGCTCCCCAGTTGGAAATTGCCTTTTTCATCCCGCTGAATGCAA 10930
Query 16126 TTTCAGTATTAACACCTGATTTCTCCCATTGAGAGAATAAAGCGATTGATTCTTTCATCT 16185
| |||||||||||||| | ||| |||||| | || | || ||||| || | | |
Sbjct 10931 TCTCAGTATTAACACCCGCTTTTTCCCATCCGGCAAACATCGCAATTGAAGTTTGCGTAT 10990
Query 16186 CAAAGCCCATAGCCCTCATTGGAGCACCGTATTTAGTAATGCTATCAGCTAATGTATCAA 16245
||| || | || | ||| || || || ||||| | | | | | ||||| |||||
Sbjct 10991 CAAGCCCAAGCGCACGCATAGGCGCGCCATATTTCGCCAGATTTCCGGTTAATGAATCAA 11050
Query 16246 CACTTATACCGCTAGCCTGTGCTGCTTTCGCTACCATATCAAGTACACTTTGATACTCAT 16305
| ||||| || || ||| | | |||||| | ||| | ||| ||||
Sbjct 11051 TTGAAACCCCGCTCTTTTGCGCCGCTACGGTCAGCATATCCAAGACAGTACCATATTCAT 11110
Query 16306 CAGCTTCAATACCTGCATCACCCATTGCACGCGTAA 16341
|| | ||| | ||||| ||||| ||||| ||||
Sbjct 11111 TGGCATTAATCTCAGCATCCCCCATAGCACGGGTAA 11146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 139830820983840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |