Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_026016.1 Length=43748 Score E Sequences producing significant alignments: (Bits) Value seq6928 132 1e-26 >seq6928 Length=39225 Score = 132 bits (146), Expect = 1e-26 Identities = 269/396 (68%), Gaps = 4/396 (1%) Strand=Plus/Plus Query 15948 ATAGCATCTGCTAAATCAGGACCTGCTTTTGCACCAAATGCTTCAATCGCTAAACTTGTT 16007 ||||| || |||||||| || || ||||| || ||||||||||||||||| | ||| || Sbjct 10753 ATAGCGTCCGCTAAATCGGGGCCGGCTTTCGCTCCAAATGCTTCAATCGCCATACTGGTC 10812 Query 16008 GCGCTAGCTATATCCGGTG--TCCTTTCAATTTCTGCTAATGTCTTCTTAAATTCTTCTC 16065 || | || |||||||| | ||||| | | |||| | ||| || |||||| | | Sbjct 10813 GCTGTTGCAATATCCGGCGCATCCTTG-ATCTGCTGC-ATTGTTTTTCCGAATTCTACAC 10870 Query 16066 TTGGGTCTTTACCCGCTTTACCCCAATTGGATATAGCTTTTTTCAAACCACTGAAGGCTA 16125 | | |||||| || || ||||| ||||| || || ||||||| || ||||| || | Sbjct 10871 TCGCGTCTTTTCCAGCGGCTCCCCAGTTGGAAATTGCCTTTTTCATCCCGCTGAATGCAA 10930 Query 16126 TTTCAGTATTAACACCTGATTTCTCCCATTGAGAGAATAAAGCGATTGATTCTTTCATCT 16185 | |||||||||||||| | ||| |||||| | || | || ||||| || | | | Sbjct 10931 TCTCAGTATTAACACCCGCTTTTTCCCATCCGGCAAACATCGCAATTGAAGTTTGCGTAT 10990 Query 16186 CAAAGCCCATAGCCCTCATTGGAGCACCGTATTTAGTAATGCTATCAGCTAATGTATCAA 16245 ||| || | || | ||| || || || ||||| | | | | | ||||| ||||| Sbjct 10991 CAAGCCCAAGCGCACGCATAGGCGCGCCATATTTCGCCAGATTTCCGGTTAATGAATCAA 11050 Query 16246 CACTTATACCGCTAGCCTGTGCTGCTTTCGCTACCATATCAAGTACACTTTGATACTCAT 16305 | ||||| || || ||| | | |||||| | ||| | ||| |||| Sbjct 11051 TTGAAACCCCGCTCTTTTGCGCCGCTACGGTCAGCATATCCAAGACAGTACCATATTCAT 11110 Query 16306 CAGCTTCAATACCTGCATCACCCATTGCACGCGTAA 16341 || | ||| | ||||| ||||| ||||| |||| Sbjct 11111 TGGCATTAATCTCAGCATCCCCCATAGCACGGGTAA 11146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139830820983840