Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 109 5e-19
seq783 84.2 2e-11
>seq2315
Length=138946
Score = 109 bits (120), Expect = 5e-19
Identities = 171/243 (70%), Gaps = 4/243 (2%)
Strand=Plus/Plus
Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233
|||||| | ||||| || || || || ||||| | || || | ||||| ||| |
Sbjct 32992 CATGCAGATCTTTGTGAAGACCTTGACAGGAAAGACAATTACATTGGAAGTGGAACCTTC 33051
Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
||||| || ||| | |||||| ||| ||| ||||| ||||| || || || || ||
Sbjct 33052 AGATACCATTGAGAATGTAAAAGCAAAGATTCAAGATAAGGAGGGAATCCCTCCAGACCA 33111
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTAC 25351
||| |||||||||| | |||||||| ||||| |||| | | | | |||| |||||
Sbjct 33112 GCAGAGACTCATTTTTGCTGGCAAACAGCTCGAGGATGGTCGCACACTTTCAG--ATTAC 33169
Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGATCA 25411
|||||||| ||||| || || | ||||| || | | || |||| || | ||| ||
Sbjct 33170 AATATTCAGAAAGAGTCTACTCTGCATTTGGTTCTCCGTCTGCGAGGTGGTTATTGAACA 33229
Query 25412 TTC 25414
|||
Sbjct 33230 TTC 33232
>seq783
Length=580412
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/214 (69%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| || || | || || ||| | ||||| | ||||| || |||
Sbjct 389901 ATGCAGATTTTTGTGAAGACTCTTACTGGCAAAACCATCACTCTAGAAGTTGAGGCCTCA 389960
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || ||||| | || ||| || ||| ||||| || || || || || || ||
Sbjct 389961 GACACAATCGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGCATTCCCCCAGACCAA 390020
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|| ||| | || | | |||||| || || ||||||| ||| |||| ||| ||||
Sbjct 390021 CAGAGATTGATCTTTGCCGGCAAGCAGCTTGAAGATGGACGAACCCTGTC--CGACTACA 390078
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386
| |||||||||||||| || ||||| | |||||
Sbjct 390079 ACATTCAAAAAGAATCTACACTTCATCTTGTGTT 390112
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||||||||| | ||||| ||| | || || | |||||||| ||
Sbjct 390129 ATGCAGATTTTTGTAAAAACTCTTACCGGGAAAACTATTACTTTGGAAGTCGAGGCTTCG 390188
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| |||||| | || ||| |||||| || || || || || || || || ||
Sbjct 390189 GATACGATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGCATTCCCCCAGACCAA 390248
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| ||| | || | | ||||| || ||||| || | ||| | | ||||||||
Sbjct 390249 CAGAGATTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCAGATTACAAC 390308
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390
||||| |||||||| || | ||| | ||| | |||
Sbjct 390309 ATTCAGAAAGAATCTACACTCCATCTTGTGCTGAGA 390344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444956465245440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |