Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_026609.1 Length=74806 Score E Sequences producing significant alignments: (Bits) Value seq2145 84.2 1e-11 >seq2145 Length=99266 Score = 84.2 bits (92), Expect = 1e-11 Identities = 179/265 (68%), Gaps = 7/265 (3%) Strand=Plus/Minus Query 71786 TGTAGGG-AGTACTTCAGAAGTAACCCAATGCTTGAATGCTTTAGCTGTTGGCAACTTAC 71844 || |||| ||||| || ||||||||||| ||||||| || | || | |||| ||| | Sbjct 93841 TGGAGGGCAGTACCTCGGAAGTAACCCACCGCTTGAACGCCCTGGCCTTGGGCAGCTTGC 93782 Query 71845 TGGACAAGATTAAGCTATAGAGCCCAGACTCATTTATAATTAGCAAGCCACGATTTGGGA 71904 |||| | ||| | || || || || || || || |||| ||| ||||| || || Sbjct 93781 TGGAGAGGATGAGACTGTACAGGCCGGATTCGTTGATAAAGGTCAAACCACGGTTGGG-- 93724 Query 71905 TATTTTCTAAATTCCCATTTTGGGAACTTAGA---ACTTGCTTGTCCTCATTATCAACAT 71961 | ||||||| | | || | || |||||| || ||||||||||| ||||||| | Sbjct 93723 -AATTTCTAAGGTAACGATTCGTGACCTTAGAACCACCTGCTTGTCCTCGGTATCAACGT 93665 Query 71962 GGTTGATAACTGCTTTGCTCGGGTTAGAGTAACCAAGAACAGTTGCAACATCCTTGCCTA 72021 | | | ||| || | || | |||||| | | || || || ||||| || | Sbjct 93664 GATCTCCCAATGCCTTTTTACTATTGGTGTAACCCAAAGCATCAGCCACGTCCTTACCCA 93605 Query 72022 CAAACCAAGGATCACCATTAATCTC 72046 | ||||| || | |||| |||||| Sbjct 93604 CGAACCACGGCACCCCATCAATCTC 93580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 239182108684904