Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq783 140 3e-28 seq2315 127 2e-24 seq242 116 4e-21 seq1551 93.3 4e-14 seq211 91.5 1e-13 >seq783 Length=580412 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||||||||||| || || || || ||||| |||||||||||||||||| Sbjct 390129 TTCCACCACGAAGTCGCAACACAAGATGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGG 390070 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | || || ||||| ||||| ||||| ||||| | ||| || || || | Sbjct 390069 ACAGGGTTCGTCCATCTTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGGG 390010 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | |||||||| || || ||||| || |||||| || | |||||| || | || | Sbjct 390009 GAATGCCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCGATTGTGTCTGAGGCCTCAA 389950 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || ||||| |||||||| || || | ||| || || ||||| |||||| Sbjct 389949 CTTCTAGAGTGATGGTTTTGCCAGTAAGAGTCTTCACAAAAATCTGCATT 389900 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||||| | ||| | ||| || ||||||||||| |||||||||||||| Sbjct 391351 CCACCCCTGAGTCTAAGCACCAAGTGGAGAGTGGATTCCTTCTGAATGTTGTAGTCAGAC 391292 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || || ||||| || ||||| || | |||||||||||| || || Sbjct 391291 AGGGTTCGTCCATCTTCAAGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGA 391232 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || |||||||| ||| || || | |||||| || | || || Sbjct 391231 ATGCCCTCCTTATCCTGAATTTTGGCTTTCACATTTTCGATTGTGTCTGAAGCCTCAACT 391172 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| |||||||| || || ||||| || |||||||| ||||| Sbjct 391171 TCCAAAGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAAATCTGCAT 391125 Score = 125 bits (138), Expect = 7e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 |||| || ||| || || || || ||||| || ||||||||||| || || || | Sbjct 390346 AGTCTCAGCACAAGATGGAGTGTAGATTCTTTCTGAATGTTGTAATCTGAAAGAGTTCGG 390287 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| ||||| ||||| | ||| || || || || |||||||| Sbjct 390286 CCGTCCTCGAGCTGCTTGCCAGCAAAGATCAATCTCTGTTGGTCTGGGGGAATGCCTTCC 390227 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || |||||||| |||||| || | || || || | || || || | |||| Sbjct 390226 TTGTCCTGAATTTTGGCTTTGACATTCTCGATCGTATCCGAAGCCTCGACTTCCAAAGTA 390167 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || ||||| ||||| | |||||| || ||||| |||||| Sbjct 390166 ATAGTTTTCCCGGTAAGAGTTTTTACAAAAATCTGCATT 390128 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || ||||| ||||| ||||| ||||| | ||| || || || || |||||||| || Sbjct 390511 TCCTCTAGCTGCTTGCCAGCAAAGATCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTG 390452 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || ||||| || ||| || || | ||||| || | || || || | ||| ||| Sbjct 390451 TCCTGAATCTTGGCTTTAACGTTTTCGATCGTGTCTGAAGCCTCGACTTCCAAAGTGATG 390392 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||| || | ||||| |||||||| ||||| Sbjct 390391 GTTTTACCAGTAAGGGTTTTCACGAAAATCTGCAT 390357 >seq2315 Length=138946 Score = 127 bits (140), Expect = 2e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 134526 TTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATC 134585 ||||||||||| ||||| || ||| | || || |||||||| ||||| |||||| Sbjct 26965 TTTTGAATGTTATAGTCTGAAAGTGTGCGTCCATCTTCCAGCTGTTTCCCTGCGAAAATC 26906 Query 134586 AAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCC 134645 || | ||||||||| || || || || ||||| |||||||||||| ||| || || Sbjct 26905 AATCTCTGCTGATCAGGAGGAATCCCCTCTTTGTCTTGAATTTTTGCTTTTACATTCTCA 26846 Query 134646 AATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 | || || || | |||||| || || || ||||||||||| || | |||||| || ||| Sbjct 26845 ATGGTATCAGATGGTTCCACCTCAAGGGTTATGGTTTTACCAGTAAGAGTTTTCACAAAA 26786 Query 134706 ATTTGCAT 134713 || ||||| Sbjct 26785 ATCTGCAT 26778 Score = 116 bits (128), Expect = 4e-21 Identities = 142/192 (74%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG--TCGTCGAGCTGTTTGCCTGCAAA 134581 |||||||||| |||||||| | || ||||| || || || | ||||||||||||||| Sbjct 27709 CCTTTTGAATATTGTAGTC--CGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAA 27652 Query 134582 AATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGC 134641 ||| || ||||||||||| || || || |||||||| |||||||| ||| || || Sbjct 27651 AATTAATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATT 27592 Query 134642 GTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAAC 134701 || | || || || | ||| || || || || |||||||| || || | || || || Sbjct 27591 TTCAATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCAC 27532 Query 134702 GAAAATTTGCAT 134713 || || ||||| Sbjct 27531 AAATATCTGCAT 27520 Score = 113 bits (124), Expect = 5e-20 Identities = 140/190 (74%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 134526 TTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG--TCGTCGAGCTGTTTGCCTGCAAAAA 134583 ||||| || |||||||| | || ||||| || || || | ||||||||||||||||| Sbjct 28209 TTTTGGATATTGTAGTC--CGACAGTGTGCGACCATCTTCCAACTGTTTGCCTGCAAAAA 28152 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 | || ||||||||||| || || || |||||||| |||||||||||| || || | Sbjct 28151 TTAATCGCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGAATTTTTGCCTTTACATTTT 28092 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | || || || | ||| || || || || |||||||| || || | || || || | Sbjct 28091 CAATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTGCCTGTGAGGGTCTTCACAA 28032 Query 134704 AAATTTGCAT 134713 | || ||||| Sbjct 28031 ATATCTGCAT 28022 Score = 102 bits (112), Expect = 8e-17 Identities = 139/192 (72%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG--TCGTCGAGCTGTTTGCCTGCAAA 134581 |||||||||| |||||||| | || ||||| | || || | |||||| |||||||| Sbjct 29150 CCTTTTGAATATTGTAGTC--CGACAGTGTGCGGCCATCTTCCAACTGTTTTCCTGCAAA 29093 Query 134582 AATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGC 134641 ||| || |||||||| || || || || |||||||| |||||||| ||| || || Sbjct 29092 AATTAATCGCTGCTGGTCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATT 29033 Query 134642 GTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAAC 134701 || | || || || | ||| || || || || |||||||| || || | || || || Sbjct 29032 TTCAATGGTATCAGATGGTTCTACCTCCAGTGTGATGGTTTTTCCTGTGAGGGTCTTCAC 28973 Query 134702 GAAAATTTGCAT 134713 || || ||||| Sbjct 28972 AAATATCTGCAT 28961 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || || || || ||||| ||||| || || ||| || || ||||||||| Sbjct 33195 TGCAGAGTAGACTCTTTCTGAATATTGTAATCTGAAAGTGTGCGACCATCCTCGAGCTGT 33136 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 ||||| |||||||| | | |||||| || || || || || || || |||||||| ||| Sbjct 33135 TTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGAGGGATTCCCTCCTTATCTTGAATCTTT 33076 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||| || || | || || || | |||||| || | ||||| || || || || Sbjct 33075 GCTTTTACATTCTCAATGGTATCTGAAGGTTCCACTTCCAATGTAATTGTCTTTCCTGTC 33016 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || ||||| Sbjct 33015 AAGGTCTTCACAAAGATCTGCAT 32993 >seq242 Length=1788442 Score = 116 bits (128), Expect = 4e-21 Identities = 121/159 (76%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || ||||| || || ||||||||||| | ||| ||||| || || |||||||| || Sbjct 1569931 TCCTCTAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCAGGAGGGATGCCTTCCTTG 1569872 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 ||||| ||||| ||| || || | || || || | ||| || ||||| ||||| Sbjct 1569871 TCTTGGATTTTGGCTTTCACATTTTCAATAGTATCAGAGGCTTCAACCTCGAGGGTAATT 1569812 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 |||||||| ||||||||||| ||||| || |||||| || Sbjct 1569811 GTTTTACCCGTTAAAGTTTTCACGAATATCTGCATTATG 1569773 >seq1551 Length=444118 Score = 93.3 bits (102), Expect = 4e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || ||||| || ||||| || | |||||||||||| || |||||||| | || || || Sbjct 25191 AGTTGTTTACCAGCAAAGATAAGACGCTGCTGATCTGGAGGTATGCCCGCCTTATCCTGG 25250 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||||| ||| || || | |||||| || | || || || | ||| |||||||| Sbjct 25251 ATTTTGGCTTTTACATTTTCGATTGTGTCTGAAGCCTCAACTTCCAAAGTGATGGTTTTG 25310 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || |||||||| ||||| Sbjct 25311 CCAGTCAAAGTCTTGACGAAAATCTGCAT 25339 >seq211 Length=1809889 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 8761 CAATACGACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGC 8820 || || ||||||||||||||||| || || ||||| | ||| ||| |||| | Sbjct 922414 CAGTATGACATGTGGAATGTCACACCAACAGACCTGTGGGACTGGGCTGATCTGAA--GA 922471 Query 8821 AAA--ATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCA 8878 || ||||| || ||| | ||||| || || | | ||| |||||| || || Sbjct 922472 AACGTATTGCACAGCATGGTGTTCGCAACTCTTTGCTTCTTGCTCCCATGCCTACGGCTT 922531 Query 8879 CGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACG 8938 | |||||||||||| |||||||||| ||||| |||||||| | ||| | ||| | ||| Sbjct 922532 CCACTGCTCAAATATTGGGAAACAATGAATCTTTTGAGCCATACACAACGAACATCTACT 922591 Query 8939 TGAGACGAGTGTTGGCCGGCGATTTT 8964 ||| |||| || |||| || ||| Sbjct 922592 CAAGAAGAGTTCTGTCCGGAGAATTT 922617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505241777035840