Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq1604 95.1 1e-14 seq1752 89.7 6e-13 seq179 84.2 2e-11 >seq1604 Length=351056 Score = 95.1 bits (104), Expect = 1e-14 Identities = 60/65 (92%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 157437 CAGTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCAGGTTCGAGTCCT 157496 ||||||||||| |||||||||||||||||||||||||||| |||| ||||||||| |||| Sbjct 255407 CAGTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCT 255348 Query 157497 GCCTG 157501 | ||| Sbjct 255347 GACTG 255343 >seq1752 Length=186427 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 157439 GTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCAGGTTCGAGTCCTG 157497 ||||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||| Sbjct 14697 GTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCTCAGGTTCGAATCCTG 14639 >seq179 Length=2312354 Score = 84.2 bits (92), Expect = 2e-11 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 157434 GGTC-AGTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCAGGTTCGAG 157492 |||| |||||||||| ||||||||||||| ||||||||||| || |||| ||||||||| Sbjct 786961 GGTCTAGTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCTCAGGTTCGAA 786902 Query 157493 TCCTGCCT 157500 ||||| || Sbjct 786901 TCCTGACT 786894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559330609710400