Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_027125.1 Length=47142 Score E Sequences producing significant alignments: (Bits) Value seq3436 122 3e-23 >seq3436 Length=2346199 Score = 122 bits (134), Expect = 3e-23 Identities = 305/454 (67%), Gaps = 26/454 (6%) Strand=Plus/Minus Query 35877 TCATTACGAATATTCAGATAATTATAATGATTTCGGCCACAATCA--TGGTAATGATGAA 35934 ||| || || ||||| ||| ||| ||||||||| ||| ||| | |||| || ||| Sbjct 1155529 TCAATATGAGTATTCTCCTAACTATGCTGATTTCGG--ACATTCAGATAGTAACGAAGAA 1155472 Query 35935 TTCTTTAAACAAATGGATTATTTAACGCCTAATTTATTGAGAACTTTAAAACCTGGTAAA 35994 ||||| |||||||||| ||| |||| || || |||| || ||| |||| |||| | Sbjct 1155471 TTCTTCCAACAAATGGACTATCTAACACCAAACTTATATCGAGTATTACAACCCGGTAGA 1155412 Query 35995 ATAGCAGCTATTCATGTTAAAGATAGGATTCGT--TACAG--TTATCA-AAACGGAACTT 36049 ||||||||||||||||| |||||||| ||| | || | || ||| | || | | Sbjct 1155411 ATAGCAGCTATTCATGTAAAAGATAGAATTGTTCCTATGGGATTGTCAGGTATGGGATGT 1155352 Query 36050 CA-----TTTACTACTATCGACGATTTTAGCGGAAAAACAGTAGCTCATTTTGTAAAACA 36104 || |||| | || | | | | | || | |||| |||| | ||| || Sbjct 1155351 CAAACAGTTTA-TCCTTTTCATGTTGATTGC----ATACAG-----CATTATACAAAGCA 1155302 Query 36105 CGGATTTTATTTAGTAGGTAAAATTACAGTAACTACTGATGTGGTTCGTGAAAATAATCA 36164 || ||| | | || | | ||| | ||||||||| ||| | ||||||||||| Sbjct 1155301 TGGTTTTGCATACATGGGAATGAAAACAATTGTTACTGATGTAGTTAGAGAAAATAATCA 1155242 Query 36165 AACTTACCGCTTAGGTTGGTCCGAACAATGTAAAGACGCTACTAAAATGGGAGTTGGTTT 36224 ||| || | | || ||| | |||||||||||||| | ||||||||||| || || | Sbjct 1155241 AACCTATAGACTCGGATGGACAGAACAATGTAAAGATGGCACTAAAATGGGTGTGGGAAT 1155182 Query 36225 ACCTGAATACATTTTATTATTTAGaaaaaaaCCATCCGAAAGCAATAACGCTTATGCAGA 36284 || || || ||||| |||| ||||| | | || || || |||||||| || Sbjct 1155181 GCCGGAGTATCTTTTACTATTCAGAAAGCCGGCTACTGACAGGTCCAATGCTTATGCTGA 1155122 Query 36285 TGAGCCATGTGCT-AAAACAAAAGAACAATATTC 36317 | ||| ||| | ||| ||||||| | ||||| Sbjct 1155121 TATTCCA-GTGGTGAAATCAAAAGATAACTATTC 1155089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150688423510016