Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_027125.1
Length=47142
Score E
Sequences producing significant alignments: (Bits) Value
seq3436 122 3e-23
>seq3436
Length=2346199
Score = 122 bits (134), Expect = 3e-23
Identities = 305/454 (67%), Gaps = 26/454 (6%)
Strand=Plus/Minus
Query 35877 TCATTACGAATATTCAGATAATTATAATGATTTCGGCCACAATCA--TGGTAATGATGAA 35934
||| || || ||||| ||| ||| ||||||||| ||| ||| | |||| || |||
Sbjct 1155529 TCAATATGAGTATTCTCCTAACTATGCTGATTTCGG--ACATTCAGATAGTAACGAAGAA 1155472
Query 35935 TTCTTTAAACAAATGGATTATTTAACGCCTAATTTATTGAGAACTTTAAAACCTGGTAAA 35994
||||| |||||||||| ||| |||| || || |||| || ||| |||| |||| |
Sbjct 1155471 TTCTTCCAACAAATGGACTATCTAACACCAAACTTATATCGAGTATTACAACCCGGTAGA 1155412
Query 35995 ATAGCAGCTATTCATGTTAAAGATAGGATTCGT--TACAG--TTATCA-AAACGGAACTT 36049
||||||||||||||||| |||||||| ||| | || | || ||| | || | |
Sbjct 1155411 ATAGCAGCTATTCATGTAAAAGATAGAATTGTTCCTATGGGATTGTCAGGTATGGGATGT 1155352
Query 36050 CA-----TTTACTACTATCGACGATTTTAGCGGAAAAACAGTAGCTCATTTTGTAAAACA 36104
|| |||| | || | | | | | || | |||| |||| | ||| ||
Sbjct 1155351 CAAACAGTTTA-TCCTTTTCATGTTGATTGC----ATACAG-----CATTATACAAAGCA 1155302
Query 36105 CGGATTTTATTTAGTAGGTAAAATTACAGTAACTACTGATGTGGTTCGTGAAAATAATCA 36164
|| ||| | | || | | ||| | ||||||||| ||| | |||||||||||
Sbjct 1155301 TGGTTTTGCATACATGGGAATGAAAACAATTGTTACTGATGTAGTTAGAGAAAATAATCA 1155242
Query 36165 AACTTACCGCTTAGGTTGGTCCGAACAATGTAAAGACGCTACTAAAATGGGAGTTGGTTT 36224
||| || | | || ||| | |||||||||||||| | ||||||||||| || || |
Sbjct 1155241 AACCTATAGACTCGGATGGACAGAACAATGTAAAGATGGCACTAAAATGGGTGTGGGAAT 1155182
Query 36225 ACCTGAATACATTTTATTATTTAGaaaaaaaCCATCCGAAAGCAATAACGCTTATGCAGA 36284
|| || || ||||| |||| ||||| | | || || || |||||||| ||
Sbjct 1155181 GCCGGAGTATCTTTTACTATTCAGAAAGCCGGCTACTGACAGGTCCAATGCTTATGCTGA 1155122
Query 36285 TGAGCCATGTGCT-AAAACAAAAGAACAATATTC 36317
| ||| ||| | ||| ||||||| | |||||
Sbjct 1155121 TATTCCA-GTGGTGAAATCAAAAGATAACTATTC 1155089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 150688423510016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |