Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq3213 82.4 9e-11 seq1619 82.4 9e-11 >seq3213 Length=2170589 Score = 82.4 bits (90), Expect = 9e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 18905 TATGGGGTTGTAGCTCAGTTGGTTAGAGCGCCTGCCTGTCACGCAGGAAGTCGTGGGTTC 18964 ||||||| ||||||||||||||||||| ||||||||||||||||||| |||| | |||| Sbjct 785031 TATGGGGGCGTAGCTCAGTTGGTTAGAGTGCCTGCCTGTCACGCAGGAGGTCGCGAGTTC 784972 Query 18965 AAG 18967 || Sbjct 784971 GAG 784969 >seq1619 Length=182432 Score = 82.4 bits (90), Expect = 9e-11 Identities = 101/137 (74%), Gaps = 6/137 (4%) Strand=Plus/Minus Query 18914 GTAGCTCAGTTGGTTAGAGCGCCTGCCTGTCACGCAGGAAGTCGTGGGTTCAAGTCCCAT 18973 |||| ||||||||||||| ||| ||||||||||| || ||||||||||| |||||||| Sbjct 25603 GTAGTTCAGTTGGTTAGAACGCTAGCCTGTCACGCTAGAGGTCGTGGGTTCGAGTCCCAT 25544 Query 18974 C-----AATCCCGTATGCCTCCGTAGCTCA-GTGGTAGAGCAGGGCTTTTGTAAAGCTCA 19027 | | ||| ||| | | ||||| |||||||||| | | || |||| | | Sbjct 25543 CCGGGTCGCCACGTTTGCTGCTATGGCTCAGGTGGTAGAGCGCGTCCTTGGTAAGGACGA 25484 Query 19028 GGTCGCAAGTTCAAATC 19044 |||| | ||||||||| Sbjct 25483 GGTCTCCGGTTCAAATC 25467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610140458856960