Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_027399.1
Length=346602
Score E
Sequences producing significant alignments: (Bits) Value
seq3436 118 2e-21
seq2330 111 3e-19
seq3213 109 1e-18
seq95 102 2e-16
seq179 91.5 3e-13
seq875 86.0 1e-11
>seq3436
Length=2346199
Score = 118 bits (130), Expect = 2e-21
Identities = 186/261 (71%), Gaps = 8/261 (3%)
Strand=Plus/Plus
Query 48462 TCTGCTGTAACTGCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATT 48521
|||| |||| ||||| || ||||| ||||| | || ||||||||||| | ||||
Sbjct 1623022 TCTGTTGTA---GCTGGCACTAAATATCGTGGACAGTTTGAAGAACGTATCAGATCTATT 1623078
Query 48522 ATTAAAGAACTTAAAAAACGAGAAAATGTAATTTTGTTCATTGATGAAGTACATATTATG 48581
|||| || || ||||| ||||||||| || || |||||||| |||||| |||
Sbjct 1623079 CTTAATGAGCTCCAAAAAAACCCAAATGTAATCTTATTTATTGATGAGATACATACTATT 1623138
Query 48582 ATGGGTGCTGGTGGTAGCAGCACTGGATCTATGGATATGAGC-AATATCATGAAACCTGC 48640
| ||||||||| | || | | |||||||||||| ||| || || ||||||||||
Sbjct 1623139 GTTGGTGCTGGTTCT-GCTG--CCGGATCTATGGAT-GCAGCAAACATGCTGAAACCTGC 1623194
Query 48641 ACTTTCACGTGGTGATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAA 48700
||| | | || || |||| ||| || || |||||| || ||||| | | ||
Sbjct 1623195 CCTTGCGAGAGGAGAAATTCAATGTATTGGAGCTACAACTCTCGATGAATACAGGAAAAA 1623254
Query 48701 CATTGAAAAAGATGCTGCATT 48721
|| |||||||||| ||||||
Sbjct 1623255 TATCGAAAAAGATGGTGCATT 1623275
>seq2330
Length=1066040
Score = 111 bits (122), Expect = 3e-19
Identities = 174/242 (72%), Gaps = 9/242 (4%)
Strand=Plus/Minus
Query 48474 GCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATTATTAAAGAACTT 48533
|| || ||||||||||||||| |||| ||||||||||| ||| || | || ||| |
Sbjct 194598 GCAGGAACAAAATACCGTGGTCAATTTGAAGAACGTATTAAAGCGATATTGAACGAATTG 194539
Query 48534 A--AAAAACGAGAAAATGTAATTTTGTTCATTGATGAAGTACATATTATGATGGGTGCTG 48591
|||||| ||| || ||| |||| || || || |||||| || | || || |
Sbjct 194538 TCTAAAAACCCGAACATT--ATTCTGTTTATAGACGAGATACATACCATAGTAGGCGCAG 194481
Query 48592 GTGGTAGCAGCACTGGATCTATGGATATGAGCAAT-ATCATGAAACCTGCACTTTCACGT 48650
||||| ||| || ||||| ||||| ||||| || ||||||| || | | |||
Sbjct 194480 GTGGT-GCAACA--GGATCACTGGATGC-AGCAAACATGCTGAAACCGGCTTTGGCTCGT 194425
Query 48651 GGTGATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAACATTGAAAAA 48710
||||| || | ||||||||||||||| || ||||||||| | ||||||||||||
Sbjct 194424 GGTGAAATACAATGTATCGGTGCAACAACACTCGATGAATATCGCAAAAACATTGAAAAA 194365
Query 48711 GA 48712
||
Sbjct 194364 GA 194363
>seq3213
Length=2170589
Score = 109 bits (120), Expect = 1e-18
Identities = 251/375 (67%), Gaps = 20/375 (5%)
Strand=Plus/Plus
Query 49170 GGTGCTTTCATGTTTGTTGGACCATCTGGTACTGGTAAAACTGAAATCACAAAAGCACTT 49229
||| ||||| | || |||| || | || |||||||| ||| || |||||||||||
Sbjct 1170593 GGTACTTTCTTATTCCTTGGCCCGACGGGGGTAGGTAAAACCGAACTCGCAAAAGCACTT 1170652
Query 49230 GCTGAAGCAATGGGTTC-----TGAG------CTAATTCGTTTTGATATGTCAGAGTTTT 49278
|| ||| ||| ||| ||| || ||| | |||||||| || | |
Sbjct 1170653 GCAGAATTTATG--TTCAATGATGAAGACTCTCTTATTAGAATTGATATGAGTGAATATA 1170710
Query 49279 CGCAAGACCACACTGTATCTAAACTTATTGGTTCACCTCCTGGATATGTAGGACATGAAA 49338
| || | || | ||| | ||| ||||| | |||||||||||||| ||| |||||
Sbjct 1170711 TGGAAAAACATAATGTTGCACGACTGGTTGGTGCTCCTCCTGGATATGTGGGATATGAAG 1170770
Query 49339 CAGGAAATGGTCAGCTTCTTGATAAAGTTGAACAATTCCCTAATGCAGTACTTCTACTGG 49398
||| ||||| | || ||| || ||| || ||||| |||| | |
Sbjct 1170771 AAGGC---GGTCAATTGACCGAAGCAGTCAGACGCAAGCCTTATTCAGTAATTCTTTTTG 1170827
Query 49399 ATGAAATTGAAAAAGCACATCCAAAAGTACTGCTGACATTC--CTACAAGTATTGGATGA 49456
|||||||||| ||||| ||||| | || | | | ||| || ||| | || |||||
Sbjct 1170828 ATGAAATTGAGAAAGCGCATCCGGATGTTTT--TAATATTATGCTCCAAATCTTTGATGA 1170885
Query 49457 AGGGCGTTTGACTGGTTCACAAGGAAAAACAGTTTACTTTAATAATATTACTGTTATTAT 49516
||||||||||||| |||| |||| | ||||||| | ||||| |||| | | | |||||
Sbjct 1170886 TGGGCGTTTGACTGATTCAAAAGGCAGAACAGTTGATTTTAAAAATACTCTTATAATTAT 1170945
Query 49517 GACTACAAACCTTGG 49531
|||| |||| ||||
Sbjct 1170946 GACTTCAAATATTGG 1170960
Score = 86.0 bits (94), Expect = 1e-11
Identities = 234/353 (66%), Gaps = 13/353 (4%)
Strand=Plus/Plus
Query 48473 TGCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATTATTAAAGAACT 48532
||| || ||||||||||||||||| || ||||||||| | || ||||| | ||| |
Sbjct 1041909 TGCAGGGACAAAATACCGTGGTGAGTTTGAAGAACGTCTAAAAAAGATTATGGATGAAAT 1041968
Query 48533 TAAAAAACGAGAAAATGTAATTTTGTTCATTGATGAAGTACATATTATGATGGGTGCTGG 48592
| || || |||| | || | | ||||||||| | || | |||| ||||| ||
Sbjct 1041969 TCGCCAATCAGGAAATATTATCCTTGTGATTGATGAAATGCACACATTGATTGGTGCAGG 1042028
Query 48593 TGGTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCACTTTCACGTGG 48652
| |||| | || | || ||| | |||||| |||||||||| | ||| | ||
Sbjct 1042029 -AGCGGCAGAA--GGCGCAATTGATGCGGCTAATATCTTGAAACCTGCTTTATCAAGAGG 1042085
Query 48653 TGATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAACA----TTGAAA 48708
|| || | ||||| ||||||||||| | || || || ||||| | | ||||
Sbjct 1042086 AGAGATACAAGTTATTGGTGCAACAACATCGGATGAGTA----CAGAAAATATGTAGAAA 1042141
Query 48709 AAGATGCTGCATTTTCCCGCCGCTTCACTAAAATTGAT-GTAGTTGAACCTAGTATTAAC 48767
| ||| ||||||| ||||| ||| | | | || | | |||||| | | || |
Sbjct 1042142 AGGATTCTGCATTAGAACGCCGTTTC-CAATCCGTAATAATTGATGAACCAAATGTTGAT 1042200
Query 48768 GAAACACGTGAAATTATTAATGGTCTGAAAGGTACTTATGAAAAATATCATAA 48820
||| | |||||||| || ||| ||||| | |||||| | | |||||
Sbjct 1042201 GAATCTATCGAAATTATAAAAGGTTTGAAACCAAGATATGAAGATCACCATAA 1042253
>seq95
Length=1800565
Score = 102 bits (112), Expect = 2e-16
Identities = 289/434 (67%), Gaps = 10/434 (2%)
Strand=Plus/Minus
Query 48330 AAAAAGAATGCTATTCTTACT-GGTGATGCAGGAGTCGGTAAAACTCAGATCGTCGATGG 48388
||||| ||| || | |||| | ||||| ||||| || |||||||| || || || ||
Sbjct 1539276 AAAAATAATCCTCT-CTTAGTAGGTGAGGCAGGCGTTGGTAAAACGGCTATTGTGGAAGG 1539218
Query 48389 TTTTGCACAAGCC-ATTGCTGATGGTGACGTACCTGA-CTATCTGAAAGGTGTTGAGGTA 48446
| | ||| |||| |||| |||||| | ||||| || |||| | |||| | | | ||
Sbjct 1539217 TCTAGCA-AAGCGTATTGTTGATGGGCAAGTACCAGAACTAT-TAAAAGATA--GCGTTA 1539162
Query 48447 TTA--TCTCTTAACGTTTCTGCTGTAACTGCTGGTACAAAATACCGTGGTGAATTCGAAG 48504
|| || ||| | || ||| || || ||||| |||||||||||||| || ||
Sbjct 1539161 TTTATTCCCTTGATCTTGGCGCTTTATTGGCAGGTACCAAATACCGTGGTGATTTTGAGA 1539102
Query 48505 AACGTATGGAAGGTATTATTAAAGAACTTAAAAAACGAGAAAATGTAATTTTGTTCATTG 48564
|||| | ||| || | ||||| || ||||| || |||| ||||| || ||||
Sbjct 1539101 AACGCTTTAAAGCCGTTTTAAAAGACCTAAAAAAGCGTACCAATGCGATTTTATTTATTG 1539042
Query 48565 ATGAAGTACATATTATGATGGGTGCTGGTGGTAGCAGCACTGGATCTATGGATATGAGCA 48624
||||| |||||| || || ||||| || | || | || |||||||| |
Sbjct 1539041 ATGAAATACATACCATTATCGGTGCAGGCGCTACTACTGGCGGTGCTATGGATGCTTCAA 1538982
Query 48625 ATATCATGAAACCTGCACTTTCACGTGGTGATATTCGTGTTATCGGTGCAACAACTTATG 48684
|| | | ||||| || ||| ||||| | || ||| | | || | || || | |
Sbjct 1538981 ATTTATTAAAACCAGCCCTTAGCAGTGGTCAAATCCGTTGTGTAGGCTCTACCACATTTA 1538922
Query 48685 AGGAATATCGCCAGAACATTGAAAAAGATGCTGCATTTTCCCGCCGCTTCACTAAAATTG 48744
| |||||||| | |||| |||||| || || || || || ||| ||| | |
Sbjct 1538921 AAGAATATCGTGGTATTTTTGATAAAGATCACGCCTTATCGCGTCGTTTCCAGAAAGTGG 1538862
Query 48745 ATGTAGTTGAACCT 48758
|||| |||||||||
Sbjct 1538861 ATGTGGTTGAACCT 1538848
>seq179
Length=2312354
Score = 91.5 bits (100), Expect = 3e-13
Identities = 164/239 (69%), Gaps = 3/239 (1%)
Strand=Plus/Plus
Query 48474 GCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATTATTAAAGAACTT 48533
|| |||||||||||| | || |||| |||||| | ||| ||| || || | || ||
Sbjct 2060602 GCAGGTACAAAATACAGGGGACAATTTGAAGAAAGAATGAAAGCCATAATAGATGAGCTG 2060661
Query 48534 AAAAAACGAGAAAATGTAATTTTGTTCATTGATGAAGTACATATTATGATGGGTGCTGGT 48593
| |||| |||| || || || || ||||| |||||| || | || || |||
Sbjct 2060662 ATAAAAGCTACCGATGTTATATTATTTATAGATGAGATACATACAATAGTTGGCGCCGGT 2060721
Query 48594 GGTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCACTTTCACGTGGT 48653
|| | | | ||||| ||||| | ||||| | |||||||| || |||| |||
Sbjct 2060722 GGAACGA---CAGGATCACTGGATGCGGCAAATATGCTTAAACCTGCCCTGGCACGCGGT 2060778
Query 48654 GATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAACATTGAAAAAGA 48712
|| || | ||| |||||||| || || |||||||| ||||| |||||||||||
Sbjct 2060779 GAAATCCAATGTATAGGTGCAACTACCCTCGATGAATATCGACAGAATATTGAAAAAGA 2060837
>seq875
Length=1099013
Score = 86.0 bits (94), Expect = 1e-11
Identities = 158/222 (71%), Gaps = 11/222 (5%)
Strand=Plus/Minus
Query 48504 GAACGTATGGAAGGTATTATTAAAGAACTT--AAAAAACGAGAAAATGTAATTTTGTTCA 48561
||||| || | | |||| | || |||||| ||| ||| ||| || || |||||||
Sbjct 361741 GAACGAATCAAGGCTATTCTAAATGAACTTTCAAAGAACCCGAATATT--ATCTTGTTCA 361684
Query 48562 TTGATGAAGTACATATTATGATGGGTGCTGGTGGTAGCAGCACTGGATCTATGGAT-ATG 48620
|||| || |||||| || | || ||||| ||| || || ||||||||| ||
Sbjct 361683 TTGACGAGATACATACAATCGTTGGAGCTGG-CTCAGCGTCA--GGTTCTATGGATGCTG 361627
Query 48621 AGCAATATCATGAAACCTGCACTTTCACGTGGTGATATTC-GTGTTATCGGTGCAACAAC 48679
| ||||| ||||||| ||| | | |||||||| |||| ||| ||| ||||| |||||
Sbjct 361626 CG-AATATGTTGAAACCGGCATTAGCTCGTGGTGAAATTCAGTG-TATTGGTGCTACAAC 361569
Query 48680 TTATGAGGAATATCGCCAGAACATTGAAAAAGATGCTGCATT 48721
|| ||||| || | || || |||||||||| ||||||
Sbjct 361568 GCTAGATGAATACCGTAAAAATATAGAAAAAGATGGTGCATT 361527
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1108642930447208
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