Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq495 96.9 4e-15 >seq495 Length=1347633 Score = 96.9 bits (106), Expect = 4e-15 Identities = 137/188 (73%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 31222 GTCAATTTGGCAATCA--CATGAACCAAAAGCGCATAACTCGCTATGTTGAATGGTACAC 31279 || |||||||||| || |||| || | |||||||| || | ||||||||||||| Sbjct 721660 GTTAATTTGGCAACCATACATGTT--AACAATGCATAACTTGCAACATTGAATGGTACAC 721717 Query 31280 CCAATCCCAAATCGGCAGATCGTTGATATAACAAACAGGAAAGTTCATCTCCGGTCACGT 31339 | ||||||| ||| ||||| ||||| |||||| || ||||| || | || | || | Sbjct 721718 CTAATCCCATATCAGCAGAACGTTGGTATAACTGGCAAGAAAGCTCTTTGCCTGCTACAT 721777 Query 31340 AAAATTGAAATA-ACACATGACAAGGCGGCAAAGCCATTTCACAGGTATCGACGGGATTC 31398 | || |||| | ||| ||||| || || | |||||||| | |||| || |||||| Sbjct 721778 AGAACTGAACGAGACA-GTGACATGGTGGGAGAGCCATTTTAGGTATATCAACTGGATTC 721836 Query 31399 CAAGCGCT 31406 ||||| || Sbjct 721837 CAAGCACT 721844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512858615845760