Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq783 131 1e-25
seq2315 89.7 4e-13
>seq783
Length=580412
Score = 131 bits (144), Expect = 1e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
||||| || | ||| | ||||| ||||||||||| ||||||||| || | | || |
Sbjct 390115 CGCAACACAAGATGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGACAGGGTTCGTCCA 390056
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||| ||||| || ||||| | || | | |||||| || || || | || || |||
Sbjct 390055 TCTTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGTTGGTCTGGGGGAATGCCTTCCTTA 389996
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| |||||| ||| | |||| | ||||||| ||| |||||||||||||| ||
Sbjct 389995 TCCTGAATCTTGGCTTTGACATTTTCGATTGTGTCTGAGGCCTCAACTTCTAGAGTGATG 389936
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| |||||| || ||||| |||||||| || |||||
Sbjct 389935 GTTTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 389901
Score = 82.4 bits (90), Expect = 6e-11
Identities = 132/190 (69%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 27058 CTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAA 27117
|||| || ||||||||||| || | | ||||||| | ||||| || || | |
Sbjct 387247 CTTTCTGTATATTGTAGTCTGACAGCGTTCTTCCGTCTTCCAATTGTTTGCCAGCAAAGA 387188
Query 27118 TGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTT 27177
| | | |||||| || || || | |||||||| || ||||| |||| | | |
Sbjct 387187 TTAATCTCTGTTGGTCTGGAGGAATTCCCTCTTTGTCTTGAATCTTAGCCTTCACGTTCT 387128
Query 27178 CTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAA 27237
| | || |||| |||||||||||||| || |||| ||| || ||||| || ||||| |
Sbjct 387127 CAATGGTATCTGAAGCTTCAACTTCTAGGGTGATAGTTTTCCCTGTCAGGGTCTTCACGA 387068
Query 27238 AGATTTGCAT 27247
| || |||||
Sbjct 387067 AAATCTGCAT 387058
>seq2315
Length=138946
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| || | |||||||| | ||||| ||||| ||||||||||| ||
Sbjct 33219 CCACCTCGCAGACGGAGAACCAAATGCAGAGTAGACTCTTTCTGAATATTGTAATCTGAA 33160
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| | || ||||||||||| || || ||||||| | ||| || || || ||
Sbjct 33159 AGTGTGCGACCATCCTCGAGCTGTTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGAGGG 33100
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| ||||| ||||| ||| | | || | || |||| | ||| |||
Sbjct 33099 ATTCCCTCCTTATCTTGAATCTTTGCTTTTACATTCTCAATGGTATCTGAAGGTTCCACT 33040
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| | || || | || || |||| || ||||||||||| |||||
Sbjct 33039 TCCAATGTAATTGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCAT 32993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424806005008704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |