Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq2029 95.1 3e-15 >seq2029 Length=231691 Score = 95.1 bits (104), Expect = 3e-15 Identities = 175/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 41199 GGCAACGATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGTTGCTAATCTAAGCATC 41258 || || || |||||||| || || ||||| | |||| || || || | | | | Sbjct 11747 GGTAATGAGCCAGAAATGCGCTATATGCCTAACGGCAATGCAGTAGCAACTGTTTCTTTA 11688 Query 41259 GCCACAACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAGAACAAACGGAATGG 41318 ||||| |||| ||||| ||||||| || || || | | |||| || |||||| Sbjct 11687 GCCACTTCTGACGCATGGAAAGATAAAAATACTGGTGAACAACAGGAACGTACCGAATGG 11628 Query 41319 CACCGCGTTGTCATCTTCGGTAAGCTGGCAGAAATTGCTAGCGAATACCTGCGCAAAGGT 41378 |||||||| || |||| |||||| | || ||||| | | | |||| ||| |||||| Sbjct 11627 CACCGCGTAGTATTCTTTGGTAAGTTAGCTGAAATCGTTGGGCAATATGTGCATAAAGGT 11568 Query 41379 AGCAAGGTGTTCATTGAAGGCAGCCTGCGAACGCGTAAATGGCAGGACCAGGCTGGCGTT 41438 ||| ||| | |||||| | || | ||| ||||||||| || ||| || ||| Sbjct 11567 TCAAAGCTGTATGTAGAAGGCCGTCTACAAACCCGTAAATGGACTGATCAGCAAGGTGTT 11508 Query 41439 GATCGCTACACCACTGA 41455 || || || || ||||| Sbjct 11507 GACCGTTATACTACTGA 11491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133170382427712