Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_027995.1
Length=41666
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 95.1 3e-15
>seq2029
Length=231691
Score = 95.1 bits (104), Expect = 3e-15
Identities = 175/257 (68%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 41199 GGCAACGATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGTTGCTAATCTAAGCATC 41258
|| || || |||||||| || || ||||| | |||| || || || | | | |
Sbjct 11747 GGTAATGAGCCAGAAATGCGCTATATGCCTAACGGCAATGCAGTAGCAACTGTTTCTTTA 11688
Query 41259 GCCACAACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAGAACAAACGGAATGG 41318
||||| |||| ||||| ||||||| || || || | | |||| || ||||||
Sbjct 11687 GCCACTTCTGACGCATGGAAAGATAAAAATACTGGTGAACAACAGGAACGTACCGAATGG 11628
Query 41319 CACCGCGTTGTCATCTTCGGTAAGCTGGCAGAAATTGCTAGCGAATACCTGCGCAAAGGT 41378
|||||||| || |||| |||||| | || ||||| | | | |||| ||| ||||||
Sbjct 11627 CACCGCGTAGTATTCTTTGGTAAGTTAGCTGAAATCGTTGGGCAATATGTGCATAAAGGT 11568
Query 41379 AGCAAGGTGTTCATTGAAGGCAGCCTGCGAACGCGTAAATGGCAGGACCAGGCTGGCGTT 41438
||| ||| | |||||| | || | ||| ||||||||| || ||| || |||
Sbjct 11567 TCAAAGCTGTATGTAGAAGGCCGTCTACAAACCCGTAAATGGACTGATCAGCAAGGTGTT 11508
Query 41439 GATCGCTACACCACTGA 41455
|| || || || |||||
Sbjct 11507 GACCGTTATACTACTGA 11491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133170382427712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |