Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_027996.1 Length=175720 Score E Sequences producing significant alignments: (Bits) Value seq2134 91.5 2e-13 seq179 82.4 9e-11 >seq2134 Length=118285 Score = 91.5 bits (100), Expect = 2e-13 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 8092 AAGTTAAACTTATCTATATTGACCCACCTTATAATACAGGCAATACTAGTTT--TAATTA 8149 |||| ||| |||||| || ||||| || |||||||| ||| | | |||| | | || Sbjct 7941 AAGTGAAATGTATCTACATCGACCCGCCGTATAATACTGGCTCTGC--GTTTCCTCAATA 7998 Query 8150 TAACGACAAATTTAAACACACTACTTGGCTTACTTTTATGAAAAATCGCCTTGAAATTGC 8209 ||||| || | |||||| | ||||||| |||| ||| || | | |||||| Sbjct 7999 CGACGACGGATATGAACACAGCATTTGGCTTTCTTTAATGCGTGATAGATTGGAAATTTT 8058 Query 8210 TAGAGAATTTTTAAGAGATGATGGTGTAATATTCGTTCAATGT-GACGATAATGAACAAG 8268 || | ||||| |||||||||| || || | | | | | || || |||||||||| Sbjct 8059 ACGAAATCTTTTAGCAGATGATGGTAGTAT-TTGGATAAGTATTGATGACAATGAACAAG 8117 Query 8269 CATATTTAAAAGTACTTATGGATGAGATATTTGGTAGAGAGAATTTTGTTAA 8320 ||||| ||||| | | ||||||||||| ||||| | | || ||| |||| Sbjct 8118 CATATCTAAAAATGTTGATGGATGAGATTTTTGGGCGTAATAACTTTATTAA 8169 >seq179 Length=2312354 Score = 82.4 bits (90), Expect = 9e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 112373 GTAGCTCAGCTGGATAGAGCGACAGCCTTCTAAGCCGTAGGTCAAAGGTTCGAGTCCT 112430 |||||||||||||||||||| || ||||||||||||||||||| |||||||| |||| Sbjct 786955 GTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCTCAGGTTCGAATCCT 786898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562001781657600