Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_027996.1
Length=175720
Score E
Sequences producing significant alignments: (Bits) Value
seq2134 91.5 2e-13
seq179 82.4 9e-11
>seq2134
Length=118285
Score = 91.5 bits (100), Expect = 2e-13
Identities = 162/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 8092 AAGTTAAACTTATCTATATTGACCCACCTTATAATACAGGCAATACTAGTTT--TAATTA 8149
|||| ||| |||||| || ||||| || |||||||| ||| | | |||| | | ||
Sbjct 7941 AAGTGAAATGTATCTACATCGACCCGCCGTATAATACTGGCTCTGC--GTTTCCTCAATA 7998
Query 8150 TAACGACAAATTTAAACACACTACTTGGCTTACTTTTATGAAAAATCGCCTTGAAATTGC 8209
||||| || | |||||| | ||||||| |||| ||| || | | ||||||
Sbjct 7999 CGACGACGGATATGAACACAGCATTTGGCTTTCTTTAATGCGTGATAGATTGGAAATTTT 8058
Query 8210 TAGAGAATTTTTAAGAGATGATGGTGTAATATTCGTTCAATGT-GACGATAATGAACAAG 8268
|| | ||||| |||||||||| || || | | | | | || || ||||||||||
Sbjct 8059 ACGAAATCTTTTAGCAGATGATGGTAGTAT-TTGGATAAGTATTGATGACAATGAACAAG 8117
Query 8269 CATATTTAAAAGTACTTATGGATGAGATATTTGGTAGAGAGAATTTTGTTAA 8320
||||| ||||| | | ||||||||||| ||||| | | || ||| ||||
Sbjct 8118 CATATCTAAAAATGTTGATGGATGAGATTTTTGGGCGTAATAACTTTATTAA 8169
>seq179
Length=2312354
Score = 82.4 bits (90), Expect = 9e-11
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 112373 GTAGCTCAGCTGGATAGAGCGACAGCCTTCTAAGCCGTAGGTCAAAGGTTCGAGTCCT 112430
|||||||||||||||||||| || ||||||||||||||||||| |||||||| ||||
Sbjct 786955 GTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCTCAGGTTCGAATCCT 786898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562001781657600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |