Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1599 89.7 6e-13
>seq1599
Length=3738065
Score = 89.7 bits (98), Expect = 6e-13
Identities = 191/281 (68%), Gaps = 6/281 (2%)
Strand=Plus/Plus
Query 14150 TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCA 14209
|| || || ||||| || |||| ||||||||| | |||||||| ||||||||||| |
Sbjct 3256147 TCGAAACCGTCCATTTCTGTCAGGAGTTGATTCAGCGTTTGTTCCCGTTCATCATTACC- 3256205
Query 14210 GGCATACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGA 14267
|| | ||| | | ||||| |||||| | || || || ||||| ||||||| ||
Sbjct 3256206 -GCCTCCCAGTGCGTTATCGCGTTTCTTACCAATGGTATCTATCTCATCTATGAAAATGA 3256264
Query 14268 TACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACAC 14327
|||| || || |||| || | ||||| ||| || ||| | || || | |
Sbjct 3256265 TACAAGGGGCTTTCTCACTTGCCTGCTTAAAGAGATCGCGGACTTTGGCTGCTCCCATGC 3256324
Query 14328 CCACAAACATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTAGATTCA 14386
| |||||||||| ||||| | || | | | || | | ||| || || || | |||
Sbjct 3256325 CGACAAACATCTGTACAAATTCGGAACCTG-ATATGGAAAAGAACGGTACTTTTGCCTCA 3256383
Query 14387 CCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 14427
|| || | || ||||||| |||||||| || || || ||
Sbjct 3256384 CCTGCCACAGCGCGGGCGATCAGGGTCTTTCCTGTTCCCGG 3256424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618243546931520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |