Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq373 86.0 5e-12 >seq373 Length=1274844 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 111814 TAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGA 111873 ||||||||||| ||||| || ||||| ||| ||||| | || | ||||||| |||| Sbjct 929513 TAACTAGCAATATTAAAGGGAACACCAAGGAAAATATCAGCTGAACGCTGATATAACTGA 929454 Query 111874 CATGATAGTTTATTTTGTGACACATAAAATTGACAAAGTACATGACAAGGAGGCAATGCC 111933 ||||||||||| | || |||||||||||| | | |||| ||||| || | |||| Sbjct 929453 CATGATAGTTTTCCATCTGCCACATAAAATTGGAATAAGGCATGGCAAGGTGGTAGTGCC 929394 Query 111934 AT 111935 || Sbjct 929393 AT 929392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391827172657096